BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0030.p (340 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SP2072 [R] COG2071 Predicted glutamine amidotransferases Spn Str... 128 2e-29 CAC1764 [R] COG2071 Predicted glutamine amidotransferases Cac Cl... 125 9e-29 FN0505 [R] COG2071 Predicted glutamine amidotransferases Fnu Fus... 125 1e-28 L120396 [R] COG2071 Predicted glutamine amidotransferases Lla La... 121 3e-27 lin1909 [R] COG2071 Predicted glutamine amidotransferases Lin Li... 114 3e-25 >SP2072 [R] COG2071 Predicted glutamine amidotransferases Spn Streptococcus pneumoniae TIGR4 Length = 242 Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 68/167 (40%), Positives = 95/167 (56%), Gaps = 8/167 (4%) Query: 147 LRDYAKHLDGLVLQGGADVSPQSYAEAATRPEWNGDRVRDMYELELLHEFIEAGKPVLGI 206 +RDY + +D L+L GG +V PQ Y E T + + VRD +EL LL E + KP++ I Sbjct: 65 VRDYVEMIDKLILTGGQNVHPQFYGEKKTVESDDYNLVRDEFELALLKEALRQNKPIMAI 124 Query: 207 CRGCQLINVAFGGSLYQDIATDVPAAIAHVNDLYDSNYHELKFPPGSTLASLVNTQNAVV 266 CRG QL+NVAFGG+L Q+I H L H ++ GS +A L ++ V Sbjct: 125 CRGVQLVNVAFGGTLNQEIE-------GHWQGLPFGTSHSIETVEGSVVAKLFGKESQ-V 176 Query: 267 NSIHHQAVKDLGRDLSVEAVSGTDNIVEAIRYRKAPFVMGLQWHPEF 313 NS+H Q++KDL + V A+ D +EAI ++GLQWHPEF Sbjct: 177 NSVHRQSIKDLAPNFRVTAIDSRDQTIEAIESIDEHRIIGLQWHPEF 223 >CAC1764 [R] COG2071 Predicted glutamine amidotransferases Cac Clostridium acetobutylicum Length = 241 Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 69/178 (38%), Positives = 97/178 (54%), Gaps = 3/178 (1%) Query: 147 LRDYAKHLDGLVLQGGADVSPQSYAEAATRPEWNGDRVRDMYELELLHEFIEAGKPVLGI 206 +++Y +DGL+L GG D++P Y E T RD YE +L + +E P+LGI Sbjct: 49 IKNYIDIIDGLILSGGEDINPLFYGENPTNKINYTSPERDEYEKKLYLKALEEDMPILGI 108 Query: 207 CRGCQLINVAFGGSLYQDIATDVPAAIAH--VNDLYDSNYHELKFPPGSTLASLVNTQNA 264 CRG QL+N GG+LYQDI V + H V + YH + S L ++ + Sbjct: 109 CRGLQLMNSVSGGNLYQDINMQVENSNGHSPVGISKSNLYHTVNIVKNSKLFNIFCEEEI 168 Query: 265 VVNSIHHQAVKDLGRDLSVEAVSGTDNIVEAIRYRKAPFVMGLQWHPEFHRAGGPELL 322 VNS HHQA+K L + A S +D IVE I ++ FV+G+QWHPE+ + PE L Sbjct: 169 KVNSFHHQAIKKLSDKFIISAQS-SDGIVEGIEHKYNTFVLGVQWHPEYLSSKYPEFL 225 >FN0505 [R] COG2071 Predicted glutamine amidotransferases Fnu Fusobacterium nucleatum Length = 243 Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/233 (35%), Positives = 122/233 (52%), Gaps = 14/233 (6%) Query: 83 MQRTLKIGISARIFHPETGAKGLRGKTLQYLEESIAQWVMSRDVLVFMIPTVNTNGLVHP 142 M+R IGIS+ + E+G+ G Y+ + V+ + +IP TN V Sbjct: 1 MERKTIIGISSSVIVDESGS--FAGYKRAYVNKDYVDAVVRAGGVPLIIP-FTTNKEVII 57 Query: 143 SNIRLRDYAKHLDGLVLQGGADVSPQSYAEAATRPEWNGDRVRDMYELELLHEFIEAGKP 202 S +L +DGL+L GG DVSP +Y + ++ RD YE+ LL E + P Sbjct: 58 SQAQL------IDGLILSGGHDVSPYNYGQEPSQKLGETFPERDTYEMILLEESKKRNIP 111 Query: 203 VLGICRGCQLINVAFGGSLYQDIATDVPAAIAHVNDLYDSNY--HELKFPPGSTLASLVN 260 +LGICRG QLINVA GG+LYQD++ +P I N + H +K S ++S+ Sbjct: 112 ILGICRGSQLINVAAGGTLYQDLSL-IPGNILKHNQVNKPTLKTHIIKIEENSIISSVFG 170 Query: 261 TQNAVVNSIHHQAVKDLGRDLSVEAVSGTDNIVEAIRYRKAPFVMGLQWHPEF 313 + +VNS HHQA+ + D V A D +VEAI ++ F++ +QWHPE Sbjct: 171 KE-TMVNSFHHQAIDKVADDFKVVA-RANDGVVEAIEHKTYKFLVAVQWHPEM 221 >L120396 [R] COG2071 Predicted glutamine amidotransferases Lla Lactococcus lactis Length = 236 Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 70/169 (41%), Positives = 95/169 (56%), Gaps = 7/169 (4%) Query: 146 RLRDYAKHLDGLVLQGGADVSPQSYAEAATRPEWNGDRVRDMYELELLHEFIEAGKPVLG 205 +++Y +D +VL GGADVSP Y E D +RD +EL + +EA KP+LG Sbjct: 52 NIKNYLTLVDKIVLTGGADVSPYLYGEEPNAKLGTTDPIRDRFELATIKAALEANKPILG 111 Query: 206 ICRGCQLINVAFGGSLYQDIATDVPAAIAHVNDLYDSNY--HELKFPPGSTLASLVNTQN 263 +CRG QL+NV FGG LYQD++ + I H+ H + S L L +N Sbjct: 112 VCRGLQLLNVYFGGRLYQDLS-QTSSQIKHLQSPTPQEIPTHHISVEQESALGFL--PEN 168 Query: 264 AVVNSIHHQAVKDLGRDLSVEAVSGTDNIVEAIRYRKAPFVMGLQWHPE 312 +VNS HHQ +KDLG+ L+ A G D +VEAI K V+ +QWHPE Sbjct: 169 YMVNSFHHQVIKDLGQGLTAIA-HGNDGLVEAIE-NKEKHVLAVQWHPE 215 >lin1909 [R] COG2071 Predicted glutamine amidotransferases Lin Listeria innocua Length = 244 Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 65/169 (38%), Positives = 95/169 (56%), Gaps = 4/169 (2%) Query: 154 LDGLVLQGGADVSPQSYAEAATRPEWNGDRVRDMYELELLHEFIEAGKPVLGICRGCQLI 213 +DGL+L GG D++PQ Y E ++ RD YE+ L+ ++AGKP+ ICRG QL+ Sbjct: 60 VDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLV 119 Query: 214 NVAFGGSLYQDIATDVPAAIAHVNDLYDS-NYHELKFPPGSTLASLVNTQNAVVNSIHHQ 272 NVA GG+LYQDI+ A+ H+ + + H + P S LA + +VNS+HHQ Sbjct: 120 NVALGGTLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAKH-HPNKKLVNSLHHQ 178 Query: 273 AVKDLGRDLSVEAVSGTDNIVEAIRYRKAP-FVMGLQWHPEFHRAGGPE 320 +K L V A + D ++EA+ P + +G+QWHPE PE Sbjct: 179 FIKKLAPSFKVTARTA-DGMIEAVEGDNLPSWYLGVQWHPELMFQTDPE 226