BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0006.p         (92 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0115 Non COG                                                       121   3e-28

>RSp0115 Non COG
          Length = 135

 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 56/86 (65%), Positives = 71/86 (82%)

Query: 1   VSAFRAIAVDVSASVDKGDLPAAKTRIKDLETQWDSAEAGLKPRAAEDWHKLDKAIDRAL 60
           + AFRAIAVD +A VDKGDLP AK RIKDLE  WD+AEAGLKPR+A DWH++DKAIDRAL
Sbjct: 45  LGAFRAIAVDTAAIVDKGDLPGAKQRIKDLEVSWDAAEAGLKPRSASDWHRVDKAIDRAL 104

Query: 61  EALRSGVPNQAECKTVMADLLKAFDR 86
           +ALR+G P+ A C+  +A+L++  D+
Sbjct: 105 DALRAGKPDAATCRQTLAELIQTIDQ 130