BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0753.p         (154 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0284 [IQR] COG1028 Dehydrogenases with different specificitie...   127   1e-29
HI0155 [IQR] COG1028 Dehydrogenases with different specificities...    73   2e-13
all1418 [IQR] COG1028 Dehydrogenases with different specificitie...    72   7e-13
SMc01175 [IQR] COG1028 Dehydrogenases with different specificiti...    69   3e-12
CC1675 [IQR] COG1028 Dehydrogenases with different specificities...    69   4e-12

>RSc0284 [IQR] COG1028 Dehydrogenases with different specificities (related
           to short-chain alcohol dehydrogenases) Rso Ralstonia
           solanacearum
          Length = 266

 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/137 (56%), Positives = 92/137 (67%), Gaps = 5/137 (3%)

Query: 1   VVIANAGISQGTLTEFAEDIPVFERIIATNVTATVATFHPFIAAM--KTQPRRQDCRLVG 58
           VVIANAGIS GT    A D+P F  ++ TN    + T  PF+  M  + +P R    LVG
Sbjct: 81  VVIANAGISVGTDLREAGDLPAFAAVMETNWMGVLHTLQPFVGPMLARAEPGRPGGTLVG 140

Query: 59  IGSVAGIRGLPGAEAYSASKAAVISYCESLRIEL---RASGIKVVTIAPGYIDTPMTQIN 115
           I SVAG+RGLPGA AYSASKAAVI   ESLR+E    R  G++VVT+APGYI TPMT+ N
Sbjct: 141 IASVAGVRGLPGAAAYSASKAAVIKLMESLRVEFSPKRRPGLRVVTLAPGYIRTPMTEHN 200

Query: 116 HYRMPFLMPVQKFAARA 132
            Y MPFLMP  +FA RA
Sbjct: 201 PYPMPFLMPADRFAERA 217


>HI0155 [IQR] COG1028 Dehydrogenases with different specificities (related
           to short-chain alcohol dehydrogenases) Hin Haemophilus
           influenzae
          Length = 242

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 69/114 (60%), Gaps = 4/114 (3%)

Query: 1   VVIANAGISQGTLTEFAEDIPVFERIIATNVTATVATFHPFIAAMKTQPRRQDCRLVGIG 60
           +++ NAGI++  L    +D   F+ I+ TN+T+    +H   A +++  +++  R++ IG
Sbjct: 80  ILVNNAGITRDNLLMRMKDEEWFD-IMQTNLTSV---YHLSKAMLRSMMKKRFGRIINIG 135

Query: 61  SVAGIRGLPGAEAYSASKAAVISYCESLRIELRASGIKVVTIAPGYIDTPMTQI 114
           SV G  G PG   Y A+KA V+ + +SL  E+ A GI V  +APG+I T MT++
Sbjct: 136 SVVGSTGNPGQTNYCAAKAGVVGFSKSLAKEVAARGITVNVVAPGFIATDMTEV 189


>all1418 [IQR] COG1028 Dehydrogenases with different specificities (related
           to short-chain alcohol dehydrogenases) Nos Nostoc sp.
           PCC 7120
          Length = 277

 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 14/118 (11%)

Query: 1   VVIANAGISQGTLTEFAE--DIPVFERIIATNVTATVATFH---PFIAAMKTQPRRQDCR 55
           ++I NAGI  G LT F E  DI +FE+++  N    V   H   P++ A + Q       
Sbjct: 93  ILINNAGI--GMLTRFDEVTDISIFEQVMQANYLGAVYCTHYALPYLKASQGQ------- 143

Query: 56  LVGIGSVAGIRGLPGAEAYSASKAAVISYCESLRIELRASGIKVVTIAPGYIDTPMTQ 113
           LV I S+ G  G+P    Y ASK A+  + ++LRIEL ++G+ V+ ++PG++ T + Q
Sbjct: 144 LVAISSICGKTGVPTRTGYVASKHAMQGFFDTLRIELHSTGVDVLVVSPGFVATDIRQ 201


>SMc01175 [IQR] COG1028 Dehydrogenases with different specificities (related
           to short-chain alcohol dehydrogenases) Sme Sinorhizobium
           meliloti
          Length = 282

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 4/131 (3%)

Query: 1   VVIANAGISQGTLTEFAEDIPVFERIIATNVTATVATFHPFIAAMKTQPRRQDCRLVGIG 60
           + + NAG++     +     P F+R  A N+   V    P +  MKT+   Q   +  + 
Sbjct: 90  LAVLNAGVALPVRGDDLRREP-FDRSFAVNLNGVVNCLVPLVEHMKTKGHGQ---IAIMS 145

Query: 61  SVAGIRGLPGAEAYSASKAAVISYCESLRIELRASGIKVVTIAPGYIDTPMTQINHYRMP 120
           SVAG  GLP + AY ASKAA+I+  ESL+ +L   GI++  I PG++DT       +  P
Sbjct: 146 SVAGYGGLPMSAAYGASKAALINMAESLKFDLDRIGIRLQVICPGFVDTQAAPKGGFPRP 205

Query: 121 FLMPVQKFAAR 131
            L+  Q+ A R
Sbjct: 206 ALVSTQEAADR 216


>CC1675 [IQR] COG1028 Dehydrogenases with different specificities (related
           to short-chain alcohol dehydrogenases) Ccr Caulobacter
           vibrioides
          Length = 246

 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 4/113 (3%)

Query: 1   VVIANAGISQGTLTEFAEDIPVFERIIATNVTATVATFHPFIAAMKTQPRRQDCRLVGIG 60
           +VIANAG+++  L    +D   ++ +I  N+      F    AA K   +R+  R++GI 
Sbjct: 84  IVIANAGVTRDGLIVRMKD-EDWDTVIKVNLEGY---FRLSRAAAKGMMKRRAGRIIGIT 139

Query: 61  SVAGIRGLPGAEAYSASKAAVISYCESLRIELRASGIKVVTIAPGYIDTPMTQ 113
           S+ G+ G PG   Y+ASKA +I + ++L  EL + G+ V  +APG+I +PMT 
Sbjct: 140 SIVGVTGNPGQTNYAASKAGMIGFSKALAQELASRGVTVNCVAPGFIASPMTD 192