BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0743.p         (204 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0402 [R] COG2802 Uncharacterized protein, similar to the N-te...   114   1e-25
PA4012 [R] COG2802 Uncharacterized protein, similar to the N-ter...   100   4e-21
VC2303 [R] COG2802 Uncharacterized protein, similar to the N-ter...    73   5e-13
mll4430 [R] COG2802 Uncharacterized protein, similar to the N-te...    66   4e-11
DR2189 [R] COG2802 Uncharacterized protein, similar to the N-ter...    65   1e-10

>RSc0402 [R] COG2802 Uncharacterized protein, similar to the N-terminal
           domain of Lon protease Rso Ralstonia solanacearum
          Length = 216

 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 100/195 (51%), Gaps = 7/195 (3%)

Query: 11  SALFPDGRLPLQIFEVRYLDMINKCIANGTSFGVVALTAGNEVRKPGLVESFVPV--GTL 68
           + LFP G LPL+IFE RY+DM+  C+   T FGV  +  GNEV         VPV  G +
Sbjct: 27  TVLFPGGLLPLRIFEARYIDMVRTCLREQTPFGVCLIERGNEVAAD---TPTVPVDIGCI 83

Query: 69  AHIREWSAPVQGLLRISCSGTSRFRIAAKEQLKHGLWMAQVEPLENDQSVAIPDELQNTV 128
           AHI E      GLL I   GT RF++ + +    GL    VEP+  D      +   + V
Sbjct: 84  AHIVECDMEQLGLLMIKARGTQRFKVRSVDTTVGGLLRGTVEPIGADLEDCKGELFDDCV 143

Query: 129 TALMNLLASLKNHSIPESDIPVAAPYRLDDCGWVSNRWSEMLPMSVEQKQGLLALDNPVL 188
            AL  ++ +L      E  +P+A PY      WV NR  E+LP+ ++ KQ L+ L +  +
Sbjct: 144 NALRRIVTTLGARE--EGQVPLAEPYDWASPSWVGNRLCELLPVPLKAKQKLMELMDAGM 201

Query: 189 RLELVQDLLGERGLL 203
           R+E+V   + +  +L
Sbjct: 202 RIEIVHRYMKQHHIL 216


>PA4012 [R] COG2802 Uncharacterized protein, similar to the N-terminal
           domain of Lon protease Pae Pseudomonas aeruginosa
          Length = 197

 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 102/195 (52%), Gaps = 9/195 (4%)

Query: 3   TIPLFPLGSALFPDGRLPLQIFEVRYLDMINKCIANGTSFGVVALTAGNEVRKPGLVESF 62
            +PLFPL + LFP  RL LQIFE RYLDMI++C+  GT FGVV +  G EV +       
Sbjct: 2   KLPLFPLNAVLFPGCRLDLQIFEARYLDMISRCMKQGTGFGVVTIGEGREVGEA--PSRL 59

Query: 63  VPVGTLAHIREWSAPVQGLLRISCSGTSRFRIAAKEQLKHGLWMAQVEPLENDQSVAIPD 122
             VG  A +R+W     GLL I   G  RF++ + E     L + ++E  E+     +  
Sbjct: 60  AMVGCEASVRDWQQRPNGLLGIRVEGGRRFQVLSVEVQADQLSVGEIEWFEDLPEQPLTY 119

Query: 123 ELQNTVTALMNLLASLKNHSIPESDIPVAAPYRLDDCGWVSNRWSEMLPMSVEQKQGLLA 182
           E  N + AL+++LA    H +  +      P    D   ++N+ + +LP   E+K  LLA
Sbjct: 120 E-HNDLAALLSVLA---EHPMVAALEMGGEPGGQQD---LANQLAYLLPFDTERKLELLA 172

Query: 183 LDNPVLRLELVQDLL 197
           L +  ++L  +Q LL
Sbjct: 173 LPDAQMQLARIQVLL 187


>VC2303 [R] COG2802 Uncharacterized protein, similar to the N-terminal
           domain of Lon protease Vch Vibrio cholerae
          Length = 193

 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 10/176 (5%)

Query: 1   METIPLFPLGSALFPDGRLPLQIFEVRYLDMINKCIANGTSFGVVALTAGNEVRKPGLVE 60
           ME I LFPL S + P+G++ L+IFE RY  M+ +C   G+ FG+    + +      L E
Sbjct: 1   MEEIMLFPLSSVVLPEGKMKLRIFEPRYQRMVAQCSKTGSGFGLCLFDSKSNKNANELSE 60

Query: 61  SFVPVGTLAHIREWSAPVQGLLRISCSGTSRFRIAAKEQLKHGLWMAQVEPLENDQSVAI 120
                GTL  I ++     GLL I+  G  RF I        GL +A V+   +  S   
Sbjct: 61  ----FGTLVKIVDFETLSDGLLGITVVGIRRFAIRKVRVEYDGLRIATVQWFPDWPS--- 113

Query: 121 PDELQNTVTALMNLLASLKNHSIPESDIPVAAPYRLDDCGWVSNRWSEMLPMSVEQ 176
             EL      L   L  +        ++     +  DD  WV  RW E+LP+S  Q
Sbjct: 114 -QELLERERFLGEQLQEVYRQFPQIGELHSLCFF--DDASWVCQRWLELLPLSKGQ 166


>mll4430 [R] COG2802 Uncharacterized protein, similar to the N-terminal
           domain of Lon protease Mlo Mesorhizobium loti
          Length = 224

 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 2/114 (1%)

Query: 3   TIPLFPL-GSALFPDGRLPLQIFEVRYLDMINKCIANGTSFGVVALTAGNEVRKPGLVES 61
           TIP+FPL G+ L P GR+PL IFE RYL M+++ +A     GV+       +R+ G  E 
Sbjct: 18  TIPIFPLEGALLLPGGRMPLNIFEPRYLQMVDEAVAGSRLIGVIQPRLDGALREDGEPE- 76

Query: 62  FVPVGTLAHIREWSAPVQGLLRISCSGTSRFRIAAKEQLKHGLWMAQVEPLEND 115
              VG    I  +S    G   IS  G  RFRIA +  +K     A+  P   D
Sbjct: 77  LCNVGCAGRIIAFSETGDGRYLISLQGVFRFRIAHELTVKTPFRQAKPAPFLAD 130


>DR2189 [R] COG2802 Uncharacterized protein, similar to the N-terminal
          domain of Lon protease Dra Deinococcus radiodurans
          Length = 213

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 1/92 (1%)

Query: 3  TIPLFPLGSALFPDGRLPLQIFEVRYLDMINKCIANGTSFGVVALTAGNEVRKPGLVESF 62
          ++PLFPL + LFP   LPL +FE RY  ++ +  A+G  FGVV +  G +   P L E  
Sbjct: 8  SLPLFPLPTVLFPGQALPLYVFEERYRALLRRVQASGEPFGVVWIERGRDSTLP-LHERL 66

Query: 63 VPVGTLAHIREWSAPVQGLLRISCSGTSRFRI 94
            VGTLAH+ E      G   I   G  RFR+
Sbjct: 67 SLVGTLAHLTEAEVHEDGTSSILVVGGERFRL 98