BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0706.p (531 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0140 [O] COG3634 Alkyl hydroperoxide reductase, large subunit ... 771 0.0 RSp0246 [O] COG3634 Alkyl hydroperoxide reductase, large subunit... 765 0.0 CC2919 Non COG 706 0.0 XF1531 [O] COG3634 Alkyl hydroperoxide reductase, large subunit ... 704 0.0 ahpF [O] COG3634 Alkyl hydroperoxide reductase, large subunit Ec... 677 0.0 >PA0140 [O] COG3634 Alkyl hydroperoxide reductase, large subunit Pae Pseudomonas aeruginosa Length = 521 Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/522 (74%), Positives = 452/522 (86%), Gaps = 4/522 (0%) Query: 1 MLDANLKAQLKAYLEKVTQPIEIVASLDDGAKSHELQELLQEIVTLSERITLVERNDHAV 60 MLDANLK QLKAYLEKV+QP EIVASLDD KS EL LLQ+IV L+++ITL A Sbjct: 1 MLDANLKTQLKAYLEKVSQPFEIVASLDDSDKSRELLGLLQDIVGLTDKITLKTDGSDA- 59 Query: 61 RKPSFSLNRPGTDISVQFAGIPMGHEFTSLVLALLQVGGHPIKLDDKVIEQIRNLDGDYS 120 RKPSFSLNRPG DI ++FAGIPMGHEFTSLVLALLQVGGHP KLD VIEQ++ ++G + Sbjct: 60 RKPSFSLNRPGADIGLRFAGIPMGHEFTSLVLALLQVGGHPSKLDADVIEQVKGIEGTFE 119 Query: 121 FETYISLTCQNCPEVVQALNVMSIINPRIRSVTVDGALFQDEVEKRQIMAVPTVYMNGEV 180 FETY SL+CQNCP+VVQALN+M+++NP IR V +DGALFQDEVE RQIM+VP++Y+NGEV Sbjct: 120 FETYFSLSCQNCPDVVQALNLMAVLNPNIRHVAIDGALFQDEVEARQIMSVPSIYLNGEV 179 Query: 181 FGQGRTGVEEILAKLDTGAAARKGEELSAKEAYDVLIVGGGPAGAAAAIYAARKGIRTGV 240 FGQGR GVEEILAK+DTGAAAR E+L+A++A+DVL+VGGGPAGAAAAIYAARKGIRTGV Sbjct: 180 FGQGRMGVEEILAKIDTGAAARDAEKLTARDAFDVLVVGGGPAGAAAAIYAARKGIRTGV 239 Query: 241 VAERFGGQVLDTLAIENFVSVKETEGPQFATALEQHVRTYDVDIMNTQRAEALVPGDG-- 298 AERFGGQVLDT+AIENF+SV+ETEGP+ A ALE+HVR Y+VDIMN QRA LVP Sbjct: 240 AAERFGGQVLDTMAIENFISVQETEGPKLARALEEHVRHYEVDIMNLQRASKLVPAKNAG 299 Query: 299 -MIEVRLANGGVLKGKTVILSTGARWRQVNVPGEDEYRNHGVAYCPHCDGPLFKGKRVSV 357 + EVR +GG LK KT+IL+TGARWR++ VPGE EY+ GV +CPHCDGPLFKGKRV+V Sbjct: 300 ELHEVRFESGGSLKAKTLILATGARWREMGVPGEQEYKAKGVCFCPHCDGPLFKGKRVAV 359 Query: 358 IGGGNSGVEAAIDLAGIVSHVTLLEFAAELKADAVLVRKLKSLPNVTIITSAQTSEITGD 417 IGGGNSGVEAAIDLAGIV+HVTLLEF ++L+ADAVL RKL SLPNV +ITSA TSE+ GD Sbjct: 360 IGGGNSGVEAAIDLAGIVAHVTLLEFDSKLRADAVLQRKLYSLPNVEVITSALTSEVKGD 419 Query: 418 GKKVNGISYKERISGEVKHIELEGVFVQIGLVPNTEWLKGTVALSKHGEIEIDAKGQTSI 477 G+KV G+ YK+R S E K IELEG+FVQIGL+PNTEWLKG+V LS GEI +DA+G+TS+ Sbjct: 420 GQKVTGLVYKDRNSEEFKSIELEGIFVQIGLLPNTEWLKGSVELSPRGEIIVDARGETSL 479 Query: 478 PGVFAAGDVTTVPYKQIVIAVGEGSKAALSAFDHLIRSSAPE 519 PG+FAAGDVTTVPYKQIVIAVGEG+KA+LSAFDHLIR+SAPE Sbjct: 480 PGIFAAGDVTTVPYKQIVIAVGEGAKASLSAFDHLIRTSAPE 521 >RSp0246 [O] COG3634 Alkyl hydroperoxide reductase, large subunit Rso Ralstonia solanacearum Length = 524 Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/524 (72%), Positives = 447/524 (85%), Gaps = 3/524 (0%) Query: 1 MLDANLKAQLKAYLEKVTQPIEIVASLDDGAKSHELQELLQEIVTLSERITLVERNDHAV 60 MLDA++KAQLKAYLE++ QPIE+VAS+DD S ++ +LL+++ S I L E+ D A Sbjct: 1 MLDADVKAQLKAYLERLVQPIELVASIDDSEGSRDMMDLLRDVAAQSGMIALTEQRDDAE 60 Query: 61 RKPSFSLNRPGTDISVQFAGIPMGHEFTSLVLALLQVGGHPIKLDDKVIEQIRNLDGDYS 120 RKPSF + R GTD+ V+FA IP GHEFTSLVLALLQVGG+ KLDD VIEQIRN++GD+ Sbjct: 61 RKPSFLIRRTGTDVGVRFAAIPTGHEFTSLVLALLQVGGYAPKLDDDVIEQIRNIEGDFR 120 Query: 121 FETYISLTCQNCPEVVQALNVMSIINPRIRSVTVDGALFQDEVEKRQIMAVPTVYMNGEV 180 FETY+SLTCQNCP+VVQALNVMS+INPRI+ V +DGALFQDEVE R+IMAVPT+++NGEV Sbjct: 121 FETYMSLTCQNCPDVVQALNVMSVINPRIQHVAIDGALFQDEVEARKIMAVPTLFLNGEV 180 Query: 181 FGQGRTGVEEILAKLDTGAAARKGEELSAKEAYDVLIVGGGPAGAAAAIYAARKGIRTGV 240 GQGR GVEEILAK+DTGAAAR E+L+A+ YDVLIVGGGPAGAAAA+YAARKG+RTGV Sbjct: 181 LGQGRMGVEEILAKIDTGAAARDAEKLNARAPYDVLIVGGGPAGAAAAVYAARKGVRTGV 240 Query: 241 VAERFGGQVLDTLAIENFVSVKETEGPQFATALEQHVRTYDVDIMNTQRAEALVPGD--- 297 VAERFGGQVLDT++IENF+SV ETEGP+FA ALEQHVR Y+VDIMN QRA L P D Sbjct: 241 VAERFGGQVLDTMSIENFISVPETEGPKFAAALEQHVRQYNVDIMNVQRAVKLTPADEPG 300 Query: 298 GMIEVRLANGGVLKGKTVILSTGARWRQVNVPGEDEYRNHGVAYCPHCDGPLFKGKRVSV 357 G+ EV LANG VLKG+++I+STGARWR VNVPGE EYRN GVAYCPHCDGPLFKGKRV+V Sbjct: 301 GLAEVTLANGAVLKGRSIIVSTGARWRNVNVPGEQEYRNRGVAYCPHCDGPLFKGKRVAV 360 Query: 358 IGGGNSGVEAAIDLAGIVSHVTLLEFAAELKADAVLVRKLKSLPNVTIITSAQTSEITGD 417 IGGGNSGVEAAIDLAGIVSHVTLLEF +LKADAVLVRKL+SLPN TI+T+AQT+EITG+ Sbjct: 361 IGGGNSGVEAAIDLAGIVSHVTLLEFGDQLKADAVLVRKLESLPNATILTNAQTTEITGN 420 Query: 418 GKKVNGISYKERISGEVKHIELEGVFVQIGLVPNTEWLKGTVALSKHGEIEIDAKGQTSI 477 G+KVNG+ Y+ R +G + LEGVFVQIGLVPNTEWL G V ++ GEI +DA+G TS+ Sbjct: 421 GEKVNGLRYRHRTNGAEHDVALEGVFVQIGLVPNTEWLDGVVERNRFGEIIVDARGHTSV 480 Query: 478 PGVFAAGDVTTVPYKQIVIAVGEGSKAALSAFDHLIRSSAPEEA 521 PGVFAAGD TTVP+KQI+IA GEG+KAALSAFDHLIR E A Sbjct: 481 PGVFAAGDSTTVPFKQIIIATGEGAKAALSAFDHLIRVPLAEAA 524 >CC2919 Non COG Length = 527 Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/525 (67%), Positives = 431/525 (82%), Gaps = 5/525 (0%) Query: 1 MLDANLKAQLKAYLEKVTQPIEIVASLDDGAKSHELQELLQEIVTLSERITLVERNDHAV 60 MLDA LKAQL YL+ + QPI +VASLDD S +++ LL ++ + S+++++ D A Sbjct: 1 MLDAGLKAQLTTYLQNLRQPITLVASLDDSKGSVDMRALLDDVASTSDKVSVRFDGDDA- 59 Query: 61 RKPSFSLNRPGTDISVQFAGIPMGHEFTSLVLALLQVGGHPIKLDDKVIEQIRNLDGDYS 120 RKPSF++ R D V+FAG+P+GHEFTSLVLALL VGGHP ++D +VIE+I+ LDGDY Sbjct: 60 RKPSFAIERAANDAEVRFAGLPLGHEFTSLVLALLHVGGHPPRIDAEVIERIKALDGDYQ 119 Query: 121 FETYISLTCQNCPEVVQALNVMSIINPRIRSVTVDGALFQDEVEKRQIMAVPTVYMNGEV 180 FETY S +CQNCP+VVQALN MS +NPRIR V +DGALF+ EVE RQ+MAVPT+ +NG+ Sbjct: 120 FETYFSQSCQNCPDVVQALNTMSALNPRIRHVAIDGALFKAEVEARQVMAVPTILLNGQA 179 Query: 181 FGQGRTGVEEILAKLDTGAAARKGEELSAKEAYDVLIVGGGPAGAAAAIYAARKGIRTGV 240 FGQGR +E+ILAKLDTGAA R E++ AK+A++VL+VGGGPAGAAAAIYAARKGIRTGV Sbjct: 180 FGQGRMEIEQILAKLDTGAADRMAEKIRAKDAFEVLVVGGGPAGAAAAIYAARKGIRTGV 239 Query: 241 VAERFGGQVLDTLAIENFVSVKETEGPQFATALEQHVRTYDVDIMNTQRAEALVPGD--- 297 AERFGGQVLDT+ IENF+SV TEGP+ A+ALEQHV+ Y+VD+MN Q+A LVP Sbjct: 240 AAERFGGQVLDTMDIENFISVPHTEGPKLASALEQHVKDYEVDVMNLQKAVGLVPAKTPG 299 Query: 298 GMIEVRLANGGVLKGKTVILSTGARWRQVNVPGEDEYRNHGVAYCPHCDGPLFKGKRVSV 357 G+ E++L NG LK +T+ILSTGARWR VNVPGE EY+N GVAYCPHCDGPLFKGKRV+V Sbjct: 300 GLHEIKLENGANLKARTLILSTGARWRNVNVPGEAEYKNKGVAYCPHCDGPLFKGKRVAV 359 Query: 358 IGGGNSGVEAAIDLAGIVSHVTLLEFAAELKADAVLVRKLKSLPNVTIITSAQTSEITGD 417 IGGGNSGVEAAIDLAGIV+HVTL+EF ++L+ADAVL RKL SLPNVTII SA T+EI GD Sbjct: 360 IGGGNSGVEAAIDLAGIVAHVTLIEFDSQLRADAVLQRKLASLPNVTIIKSAMTTEIHGD 419 Query: 418 GKKVNGISYKERISGEVKHIELEGVFVQIGLVPNTEWLKGT-VALSKHGEIEIDAKGQTS 476 G KVNG++YK+R S ++LEGVFVQIGLVPNTEWLK + VALS GEIE+D +G+TS Sbjct: 420 GSKVNGLTYKDRTSDTAHRVDLEGVFVQIGLVPNTEWLKDSGVALSPRGEIEVDYRGETS 479 Query: 477 IPGVFAAGDVTTVPYKQIVIAVGEGSKAALSAFDHLIRSSAPEEA 521 IPGVFAAGD T PYKQI+IA+GEG+KA+LSAFD+LIR A E A Sbjct: 480 IPGVFAAGDATVTPYKQIIIAMGEGAKASLSAFDYLIRLPASEAA 524 >XF1531 [O] COG3634 Alkyl hydroperoxide reductase, large subunit Xfa Xylella fastidiosa 9a5c Length = 571 Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/518 (67%), Positives = 423/518 (81%), Gaps = 3/518 (0%) Query: 1 MLDANLKAQLKAYLEKVTQPIEIVASLDDGAKSHELQELLQEIVTLS-ERITLVERNDHA 59 M D +LKAQLKAYL++V + I I AS+D+ KS E+ +LL+ IV LS +++ L D Sbjct: 41 MFDESLKAQLKAYLDRVIRSIHIHASVDESHKSREMLDLLENIVLLSGKKVVLEVHRDDD 100 Query: 60 VRKPSFSLNRPGTDISVQFAGIPMGHEFTSLVLALLQVGGHPIKLDDKVIEQIRNLDGDY 119 RKPSF L PG IS++FAG+PMGHEF SLVL LLQVGGHP K+ D +IE++RNLDG Y Sbjct: 101 QRKPSFGLGTPGESISIRFAGLPMGHEFASLVLGLLQVGGHPPKVADDLIERVRNLDGHY 160 Query: 120 SFETYISLTCQNCPEVVQALNVMSIINPRIRSVTVDGALFQDEVEKRQIMAVPTVYMNGE 179 FETY S++CQ+CP+VVQALN+ +++NP+I V +DGALFQDEVE RQIM+VPTVY+NGE Sbjct: 161 RFETYFSVSCQSCPDVVQALNMAAVLNPQIEHVAIDGALFQDEVEARQIMSVPTVYLNGE 220 Query: 180 VFGQGRTGVEEILAKLDTGAAARKGEELSAKEAYDVLIVGGGPAGAAAAIYAARKGIRTG 239 +FGQGR +E+I+AKLD+GAA R E + AK A+DVL+VG GPAG AAA+YAARKG+RTG Sbjct: 221 LFGQGRMTLEQIVAKLDSGAAKRTAESIQAKAAFDVLVVGAGPAGTAAAVYAARKGVRTG 280 Query: 240 VVAERFGGQVLDTLAIENFVSVKETEGPQFATALEQHVRTYDVDIMNTQRAEALVPG--D 297 +VAERFGGQVLDT+ IENF+SV ET+GP+ ALEQH+R Y+VDIMN QR E LVP + Sbjct: 281 LVAERFGGQVLDTMTIENFISVPETDGPRMVAALEQHLRQYEVDIMNLQRVETLVPAGEN 340 Query: 298 GMIEVRLANGGVLKGKTVILSTGARWRQVNVPGEDEYRNHGVAYCPHCDGPLFKGKRVSV 357 G IEVRLA+G L +TVILSTGARWRQ+NVPGEDEYRN GVAYCPHCDGPLFKGKRV+V Sbjct: 341 GFIEVRLASGASLSSRTVILSTGARWRQMNVPGEDEYRNKGVAYCPHCDGPLFKGKRVAV 400 Query: 358 IGGGNSGVEAAIDLAGIVSHVTLLEFAAELKADAVLVRKLKSLPNVTIITSAQTSEITGD 417 IGGGNSGVEAAIDLAGI S+VTLLEF +L+AD VL RKL+S+ NV +I AQT+E+ GD Sbjct: 401 IGGGNSGVEAAIDLAGIASYVTLLEFDTKLRADEVLQRKLRSMSNVEVIMGAQTTEVRGD 460 Query: 418 GKKVNGISYKERISGEVKHIELEGVFVQIGLVPNTEWLKGTVALSKHGEIEIDAKGQTSI 477 GKKV G+ Y +R +G + LEGVFVQIGL+PNTEWLKG V LS GEI +D G TS+ Sbjct: 461 GKKVTGLVYVDRSTGGSFTLALEGVFVQIGLLPNTEWLKGRVELSPRGEIVVDECGHTSL 520 Query: 478 PGVFAAGDVTTVPYKQIVIAVGEGSKAALSAFDHLIRS 515 PGVFAAGD TTVPYKQIVIA+GEGSKAALSAFD+LIR+ Sbjct: 521 PGVFAAGDATTVPYKQIVIAMGEGSKAALSAFDYLIRN 558 >ahpF [O] COG3634 Alkyl hydroperoxide reductase, large subunit Eco Escherichia coli K12 Length = 531 Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/518 (62%), Positives = 418/518 (80%), Gaps = 3/518 (0%) Query: 1 MLDANLKAQLKAYLEKVTQPIEIVASLDDGAKSHELQELLQEIVTLSERITLVERNDHAV 60 MLD N+K QLKAYLEK+T+P+E++A+LDD AKS E++ELL EI LS+++T E N V Sbjct: 11 MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIAELSDKVTFKEDNSLPV 70 Query: 61 RKPSFSLNRPGTDISVQFAGIPMGHEFTSLVLALLQVGGHPIKLDDKVIEQIRNLDGDYS 120 RKPSF + PG++ +FAG P+GHEFTSLVLALL GGHP K ++EQIR++DGD+ Sbjct: 71 RKPSFLITNPGSNQGPRFAGSPLGHEFTSLVLALLWTGGHPSKEAQSLLEQIRHIDGDFE 130 Query: 121 FETYISLTCQNCPEVVQALNVMSIINPRIRSVTVDGALFQDEVEKRQIMAVPTVYMNGEV 180 FETY SL+C NCP+VVQALN+MS++NPRI+ +DG FQ+E+ R +M VP V++NG+ Sbjct: 131 FETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQNEITDRNVMGVPAVFVNGKE 190 Query: 181 FGQGRTGVEEILAKLDTGAAARKGEELSAKEAYDVLIVGGGPAGAAAAIYAARKGIRTGV 240 FGQGR + EI+AK+DTGA R EEL+ ++AYDVLIVG GPAGAAAAIY+ARKGIRTG+ Sbjct: 191 FGQGRMTLTEIVAKIDTGAEKRAAEELNKRDAYDVLIVGSGPAGAAAAIYSARKGIRTGL 250 Query: 241 VAERFGGQVLDTLAIENFVSVKETEGPQFATALEQHVRTYDVDIMNTQRAEALVPG---D 297 + ERFGGQ+LDT+ IEN++SV +TEG + A AL+ HV YDVD++++Q A L+P Sbjct: 251 MGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEG 310 Query: 298 GMIEVRLANGGVLKGKTVILSTGARWRQVNVPGEDEYRNHGVAYCPHCDGPLFKGKRVSV 357 G+ ++ A+G VLK +++I++TGA+WR +NVPGED+YR GV YCPHCDGPLFKGKRV+V Sbjct: 311 GLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAV 370 Query: 358 IGGGNSGVEAAIDLAGIVSHVTLLEFAAELKADAVLVRKLKSLPNVTIITSAQTSEITGD 417 IGGGNSGVEAAIDLAGIV HVTLLEFA E+KAD VL KL+SL NV II +AQT+E+ GD Sbjct: 371 IGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKNVDIILNAQTTEVKGD 430 Query: 418 GKKVNGISYKERISGEVKHIELEGVFVQIGLVPNTEWLKGTVALSKHGEIEIDAKGQTSI 477 G KV G+ Y++R+SG++ +IEL G+FVQIGL+PNT WL+G V ++ GEI IDAK +T++ Sbjct: 431 GSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCETNV 490 Query: 478 PGVFAAGDVTTVPYKQIVIAVGEGSKAALSAFDHLIRS 515 GVFAAGD TTVPYKQI+IA GEG+KA+LSAFD+LIR+ Sbjct: 491 KGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRT 528