BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0704.p (221 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0328 [R] COG2945 Predicted hydrolase of the alpha/beta superf... 274 1e-73 NMB0868 [R] COG2945 Predicted hydrolase of the alpha/beta superf... 134 1e-31 NMA1086 [R] COG2945 Predicted hydrolase of the alpha/beta superf... 134 1e-31 XF1829 [R] COG2945 Predicted hydrolase of the alpha/beta superfa... 127 1e-29 PA4440 [R] COG2945 Predicted hydrolase of the alpha/beta superfa... 122 8e-28 >RSc0328 [R] COG2945 Predicted hydrolase of the alpha/beta superfamily Rso Ralstonia solanacearum Length = 215 Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 141/225 (62%), Positives = 162/225 (72%), Gaps = 20/225 (8%) Query: 1 MNAQTQAFLIPGAAGQLECALDLPDSEQFAAPRARARGXRAPRGLALVAHPHPLYGGTMD 60 MN T LIPG G ++ ++DLPD+ APRGLALV HPHPL+GGT D Sbjct: 1 MNVHTAERLIPGPVGNIDVSVDLPDA--------------APRGLALVGHPHPLFGGTKD 46 Query: 61 NKVAQTLARSFLALGYVTVRMNFRGVGKSAGVHDHGHGETDDMALLLAHMRTQ------Y 114 NKVAQTLAR+F+ LGY TVR NFRGVGK+ G HD+G GE DDM +L MRTQ Sbjct: 47 NKVAQTLARTFVGLGYATVRPNFRGVGKTEGTHDNGIGEQDDMLAVLDWMRTQAEWSPEV 106 Query: 115 PDLPVTLGGFSFGTFVQAQLQQRLIAEGTPAERLALVGTAAGKWPMPPVPADTILIHGEL 174 LP+ LGGFSFG+FV +Q+ +RL GTPAERLALVGTA +W + PVPADTI+IHGEL Sbjct: 107 ATLPLALGGFSFGSFVVSQVARRLAEAGTPAERLALVGTATSRWDVAPVPADTIVIHGEL 166 Query: 175 DDTIPLTAVLDWARPQELPVIVIPGADHFFHRKLQHIKTLIVQMW 219 DDT+PL AVLDWARPQELPVIVIPGADHFFHRKL I+ I W Sbjct: 167 DDTVPLAAVLDWARPQELPVIVIPGADHFFHRKLHLIRQQIAGAW 211 >NMB0868 [R] COG2945 Predicted hydrolase of the alpha/beta superfamily Nme Neisseria meningitidis MC58 Length = 213 Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 85/216 (39%), Positives = 116/216 (53%), Gaps = 25/216 (11%) Query: 10 IPGAAGQLECALDLPDSEQFAAPRARARGXRAPRGLALVAHPHPLYGGTMDNKVAQTLAR 69 I G AG LE + +P SEQ A RG+A++ HP+PL GGT NKV QT A+ Sbjct: 9 ISGPAGILE-TIHIP-SEQVPA-----------RGVAVINHPNPLQGGTNTNKVIQTAAK 55 Query: 70 SFLALGYVTVRMNFRGVGKSAGVHDHGHGETDDMALLLAHMRTQYPDLP-VTLGGFSFGT 128 + LG+ N RGVG S G HD+G GET D ++ + R Q+P+ P L GFSFG Sbjct: 56 ALSKLGFHCYLPNLRGVGGSGGTHDYGRGETQDCLAVIDYARAQHPEAPEFALSGFSFGG 115 Query: 129 FVQAQLQQRLIAEGTPAERLALVGTAAGKWPMPPVP------ADTILIHGELDDTIPLTA 182 +V A+ + L L+G A + P P A T++IHG D+ + + Sbjct: 116 YVAT-----FAAQARTPDLLLLIGAAVCHYTDRPEPSAVPNVAKTLMIHGAEDEVVEIGK 170 Query: 183 VLDWARPQELPVIVIPGADHFFHRKLQHIKTLIVQM 218 L WA PQ+LPVI I G+ HFFH KL ++ I++ Sbjct: 171 ALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRF 206 >NMA1086 [R] COG2945 Predicted hydrolase of the alpha/beta superfamily NmA Neisseria meningitidis Z2491 Length = 213 Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 86/216 (39%), Positives = 116/216 (53%), Gaps = 25/216 (11%) Query: 10 IPGAAGQLECALDLPDSEQFAAPRARARGXRAPRGLALVAHPHPLYGGTMDNKVAQTLAR 69 I G AG LE + +P SEQ A RG+A++ HP+PL GGT NKV QT A+ Sbjct: 9 ISGPAGILE-TIHIP-SEQVPA-----------RGVAVINHPNPLQGGTNTNKVIQTAAK 55 Query: 70 SFLALGYVTVRMNFRGVGKSAGVHDHGHGETDDMALLLAHMRTQYPDLP-VTLGGFSFGT 128 + LG+ N RGVG S G HD+G GET D ++ + R Q+P+ P L GFSFG Sbjct: 56 ALSKLGFHCYLPNLRGVGGSEGTHDYGRGETQDCLAVIDYARAQHPEAPEFALSGFSFGG 115 Query: 129 FVQAQLQQRLIAEGTPAERLALVGTAAGKWPMPPVP------ADTILIHGELDDTIPLTA 182 +V Q I + L L+G A + P P A T++IHG D+ + + Sbjct: 116 YVATFAAQARI-----PDLLLLIGAAVCHYTGRPEPSAVPNVAKTLMIHGAEDEVVEIGK 170 Query: 183 VLDWARPQELPVIVIPGADHFFHRKLQHIKTLIVQM 218 L WA PQ+LPVI I G+ HFFH KL ++ I++ Sbjct: 171 ALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRF 206 >XF1829 [R] COG2945 Predicted hydrolase of the alpha/beta superfamily Xfa Xylella fastidiosa 9a5c Length = 222 Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/212 (36%), Positives = 107/212 (50%), Gaps = 20/212 (9%) Query: 8 FLIPGAAGQLECALDLPDSEQFAAPRARARGXRAPRGLALVAHPHPLYGGTMDNKVAQTL 67 + G G LE A+D P +A++ HP GG+MDNKV Sbjct: 15 LFLEGPVGSLEVAVDFP-----------GFNVTTQSPVAIICHPLSTEGGSMDNKVVTMT 63 Query: 68 ARSFLALGYVTVRMNFRGVGKSAGVHDHGHGETDDMALLLAHMRTQYPDLPVTLGGFSFG 127 AR+ LG +TVR NFR VG S G+ D+GHGE D+ + A +R Q PD + L GFSFG Sbjct: 64 ARALRELGMMTVRFNFRSVGASDGMFDNGHGERADLRAIAAWVRAQRPDSALWLAGFSFG 123 Query: 128 TFVQAQLQQRLIAEGTPAERLALVGTAAGKWPMPPV--PADTILIHGELDDTIPLTAVLD 185 ++ L+AE + L + AG+W V P +LI G+ D+ + AV D Sbjct: 124 AYISL-----LVAEELEPQVLISISPPAGRWDFSHVHPPEHWLLIQGDADEVVDPQAVYD 178 Query: 186 WAR--PQELPVIVIPGADHFFHRKLQHIKTLI 215 W P++ +I +P HFFHRKL H++ I Sbjct: 179 WISTLPRQPKLIRMPDTSHFFHRKLIHLRDAI 210 >PA4440 [R] COG2945 Predicted hydrolase of the alpha/beta superfamily Pae Pseudomonas aeruginosa Length = 209 Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 82/211 (38%), Positives = 107/211 (50%), Gaps = 24/211 (11%) Query: 1 MNAQTQAFLIPGAAGQLECA-LDLPDSEQFAAPRARARGXRAPRGLALVAHPHPLYGGTM 59 M+ + I G G LE LDLPD+ RG+ALV HPHPL+ GTM Sbjct: 1 MSTREIPVSIDGPCGPLEALHLDLPDA----------------RGVALVCHPHPLFAGTM 44 Query: 60 DNKVAQTLARSFLALGYVTVRMNFRGVGKSAGVHDHGHGETDDMALLLAHMRTQYPDLPV 119 NKV TL RS G T+R NFRGVG+SAG + G GE DD + ++P LP+ Sbjct: 45 QNKVVATLQRSARDAGLATLRFNFRGVGQSAGSYGEGIGEIDDAEAAARWLLARHPGLPL 104 Query: 120 TLGGFSFGTFVQAQLQQRLIAEGTPAERLALVGTAAGKWPMP-PVPADTILIHGELDDTI 178 TL GFSFG+ V L RL A+G RL ++ ++ + P ++ E DD + Sbjct: 105 TLMGFSFGSCVAGNLAGRLEAQGVGLARLFMIAPPVERFAVSLPARCPLTVVQPEDDDVV 164 Query: 179 PLTAVLDW----ARPQELPVIVIPGADHFFH 205 AV W ARP EL + + + HFFH Sbjct: 165 TPAAVYAWSESLARPHEL--LRVAESGHFFH 193