BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0647.p         (147 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2177 [R] COG1744 Uncharacterized ABC-type transport system, p...   234   3e-62
mll0501 [R] COG1744 Uncharacterized ABC-type transport system, p...   125   3e-29
BMEII0702 [R] COG1744 Uncharacterized ABC-type transport system,...   119   3e-27
AGc3292 [R] COG1744 Uncharacterized ABC-type transport system, p...   115   3e-26
SMc00242 [R] COG1744 Uncharacterized ABC-type transport system, ...   113   1e-25

>RSc2177 [R] COG1744 Uncharacterized ABC-type transport system, periplasmic
           component/surface lipoprotein Rso Ralstonia solanacearum
          Length = 380

 Score =  234 bits (598), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 114/147 (77%), Positives = 123/147 (83%)

Query: 1   VLMQNTDSAAVVQTAQEKGVYAFGWDSDMTSFGPKAHLAASMINWGVYYTARVQAVLDGS 60
           VLMQNTDSAAVVQTAQEKG YA GWDSDMT FG KAHLAASM NWGVYYT  V  VLD  
Sbjct: 234 VLMQNTDSAAVVQTAQEKGAYAIGWDSDMTKFGDKAHLAASMNNWGVYYTKVVGDVLDNQ 293

Query: 61  WKTDTTWLGLKENGIDLGGFNPELPADVKALVEERKKGIADGSAPIWKGPIKDNTGKEQV 120
           WK+ +TW GLKE  IDLG FNP +P DVKALVE RKKG+ DGSAPIWKGP+KDNTG+E +
Sbjct: 294 WKSGSTWWGLKEGAIDLGAFNPVVPQDVKALVETRKKGVIDGSAPIWKGPLKDNTGREVL 353

Query: 121 AKDAVADDGFLHGVKFYVEGVEGKVPG 147
             D VADDGFLHG+KFYVEGVEGK+PG
Sbjct: 354 PADKVADDGFLHGIKFYVEGVEGKIPG 380


>mll0501 [R] COG1744 Uncharacterized ABC-type transport system, periplasmic
           component/surface lipoprotein Mlo Mesorhizobium loti
          Length = 355

 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 90/146 (61%), Gaps = 2/146 (1%)

Query: 1   VLMQNTDSAAVVQTAQEKGVYAFGWDSDMTSFGPKAHLAASMINWGVYYTARVQAVLDGS 60
           +++Q+TDS A +Q A+E+ ++ FG  SDM  F P A L +    WG YY +RVQA +DG+
Sbjct: 211 IIVQHTDSTAALQVAEERKLHGFGQSSDMIKFAPNAQLTSLTDEWGPYYISRVQAAIDGT 270

Query: 61  WKTDTTWLGLKENGIDLGGFNPELPADVKALVEERKKGIADGSAPIWKGPIKDNTGKEQV 120
           WK D  WLG+K+  + L  +   +P DVKAL E  +K IA G  P + GPI    G   +
Sbjct: 271 WKPDNVWLGIKDGAVKLAPYT-NMPDDVKALAEATEKKIAGGWNP-FTGPIAKQDGTPWL 328

Query: 121 AKDAVADDGFLHGVKFYVEGVEGKVP 146
               VADDG L G+ FYV+GV+ K+P
Sbjct: 329 KDGEVADDGTLLGMNFYVKGVDDKLP 354


>BMEII0702 [R] COG1744 Uncharacterized ABC-type transport system, periplasmic
           component/surface lipoprotein Bme Brucella melitensis
          Length = 363

 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 83/146 (56%), Gaps = 1/146 (0%)

Query: 1   VLMQNTDSAAVVQTAQEKGVYAFGWDSDMTSFGPKAHLAASMINWGVYYTARVQAVLDGS 60
           ++ Q+TDS A +Q A ++G+ AFG  SDM  F P   L A +  WG YY  R +AVLDG+
Sbjct: 218 IITQHTDSTAAIQVAHDRGIKAFGQASDMIKFAPDTQLTAVVDEWGPYYIDRAKAVLDGT 277

Query: 61  WKTDTTWLGLKENGIDLGGFNPELPADVKALVEERKKGIADGSAPIWKGPIKDNTGKEQV 120
           WK+   W G+KE  + +  F   +P DVK L EE +  I  G    + GPIK   G E +
Sbjct: 278 WKSQNIWWGMKEGLVKMAPFT-NMPDDVKKLAEETEARIKSGELNPFTGPIKKQDGSEWL 336

Query: 121 AKDAVADDGFLHGVKFYVEGVEGKVP 146
                ADD  L G+ FYV GV+ K+P
Sbjct: 337 KAGEKADDQTLLGMNFYVAGVDDKLP 362


>AGc3292 [R] COG1744 Uncharacterized ABC-type transport system, periplasmic
           component/surface lipoprotein Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 371

 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 59/146 (40%), Positives = 86/146 (58%), Gaps = 1/146 (0%)

Query: 1   VLMQNTDSAAVVQTAQEKGVYAFGWDSDMTSFGPKAHLAASMINWGVYYTARVQAVLDGS 60
           +L Q+TD+ A +Q A E+G+ AFG  SDM + GP+  L A    WG YY  R QA+LDG+
Sbjct: 226 ILTQHTDTTAPMQVAAERGIKAFGQASDMIAAGPQTQLTAIKDTWGAYYIKRTQALLDGT 285

Query: 61  WKTDTTWLGLKENGIDLGGFNPELPADVKALVEERKKGIADGSAPIWKGPIKDNTGKEQV 120
           WK+++ W GLK+  + +  +   +P DVK + EE +  I  G    + GP+K   G E +
Sbjct: 286 WKSESVWDGLKDGILTMAPYT-NMPDDVKKMAEETEAKIKSGELHPFTGPVKKQDGSEWL 344

Query: 121 AKDAVADDGFLHGVKFYVEGVEGKVP 146
                A+D  L G+ FYV GV+ K+P
Sbjct: 345 KAGEKAEDKVLLGLNFYVAGVDDKLP 370


>SMc00242 [R] COG1744 Uncharacterized ABC-type transport system, periplasmic
           component/surface lipoprotein Sme Sinorhizobium meliloti
          Length = 356

 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 85/146 (58%), Gaps = 1/146 (0%)

Query: 1   VLMQNTDSAAVVQTAQEKGVYAFGWDSDMTSFGPKAHLAASMINWGVYYTARVQAVLDGS 60
           ++ Q+TD+ A +Q A E+G+ AFG  SDM + GP+  L A +  WG YY  R +A LDG+
Sbjct: 211 IITQHTDTTAPMQVAAERGIKAFGQASDMIAAGPQTQLTAIVDTWGAYYVKRTKAFLDGT 270

Query: 61  WKTDTTWLGLKENGIDLGGFNPELPADVKALVEERKKGIADGSAPIWKGPIKDNTGKEQV 120
           W T ++W GLK+  + +  +   +P DVKA+ E  +  I  G    + GP+    G   +
Sbjct: 271 WSTTSSWDGLKDGILTMARYT-NMPDDVKAMAEATEAKIKSGELKPFTGPLNKQDGSPWL 329

Query: 121 AKDAVADDGFLHGVKFYVEGVEGKVP 146
            +   ADD  L G+ FYVEGV+ K+P
Sbjct: 330 KEGETADDATLLGMNFYVEGVDDKLP 355