BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0641.p (275 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc1932 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 324 1e-88 PA2294 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 200 3e-51 MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 199 8e-51 AGc4331 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 196 6e-50 AGl1027GM [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate tra... 189 4e-48 >AGc1932 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 262 Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 150/256 (58%), Positives = 189/256 (73%), Gaps = 1/256 (0%) Query: 19 FIDFRRVFLSYDGS-DEFAVEDISLQTKQGEFIAIVGPSGCGKSTFMKLATGLKRPTRGS 77 ++ V + Y GS AV ++L +GEF A+VGPSGCGKST MKL TGL P RG+ Sbjct: 4 LVEIDSVDMRYGGSAGTLAVSGLNLAVDKGEFAAVVGPSGCGKSTLMKLVTGLHIPQRGN 63 Query: 78 ISIAGADVTGPLKFVGMAFQAPTLLPWRTTLDNVLLPLEIVEPYRRDFKKNKAQYAERAL 137 + +AG VT P+ VGMAFQ PT+LPWRTTL+N+LLPLEIVE +RR + +KA Y +A Sbjct: 64 VIVAGRQVTEPVSIVGMAFQNPTMLPWRTTLENILLPLEIVEKHRRRLRAHKASYVAKAE 123 Query: 138 KLLKTVGLDGYADKFPWELSGGMQQRASICRALIHEPRMLLLDEPFGALDAFTREELWCV 197 +LL+ VGL G+ K+PW+LSGGMQQRA++CRALIHEP +L+LDEPFGALDAFTREELWCV Sbjct: 124 RLLEIVGLKGFGSKYPWQLSGGMQQRANLCRALIHEPELLMLDEPFGALDAFTREELWCV 183 Query: 198 LRDLWTERKFNVILVTHDLREAAFLADTIYVMSKRPGRIVARKENPLPRPRELELTYTDP 257 +RDL ++ +ILVTHDLREA FLAD I+VMS RPGR++A P RPR+L++ Y Sbjct: 184 IRDLHAAQRVTIILVTHDLREATFLADKIFVMSARPGRVLAEHRVPFARPRQLDIMYDKG 243 Query: 258 FNALVHELREHIGRVR 273 FN +V EL I + R Sbjct: 244 FNDMVQELHGEIAQAR 259 >PA2294 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Pae Pseudomonas aeruginosa Length = 284 Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 105/229 (45%), Positives = 143/229 (62%), Gaps = 8/229 (3%) Query: 31 GSDEF-AVEDISLQTKQGEFIAIVGPSGCGKSTFMKLATGLKRPTRGSISIAGADVTGPL 89 GS+ F AV D++L+ + GEF+ ++GPSGCGKST + G RP+ GS+ + G V GP Sbjct: 23 GSEAFEAVRDLNLEARPGEFVCLLGPSGCGKSTLLGALAGHLRPSAGSVRVDGRSVEGPS 82 Query: 90 KFVGMAFQAPTLLPWRTTLDNVLLPLEIVEPYRRDFKKNKAQYAERALKLLKTVGLDGYA 149 GM FQ TL PWR DNV L++ R A+ RA+++L VGL +A Sbjct: 83 PQRGMVFQQHTLFPWRRVRDNVAFGLKMQGLAR-------AERNRRAMEMLGLVGLADFA 135 Query: 150 DKFPWELSGGMQQRASICRALIHEPRMLLLDEPFGALDAFTREELWCVLRDLWTERKFNV 209 ++P +LSGGMQQR I R L++ PR+LL+DEPFGALDA TR ++ +L D+W + V Sbjct: 136 GRWPGQLSGGMQQRVEIARVLVNRPRLLLMDEPFGALDAQTRLKMQTLLLDVWARVRTTV 195 Query: 210 ILVTHDLREAAFLADTIYVMSKRPGRIVARKENPLPRPRELELTYTDPF 258 + VTHD+ EA +LAD + VMS RPGRI+A PRPR+ L + F Sbjct: 196 LFVTHDIDEALYLADRVLVMSPRPGRIIADLALDFPRPRDTRLVTSADF 244 >MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mac Methanosarcina acetivorans str.C2A Length = 268 Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 110/250 (44%), Positives = 154/250 (61%), Gaps = 15/250 (6%) Query: 21 DFRRVFLSY-DGSDEFAVEDISLQTKQGEFIAIVGPSGCGKSTFMKLATGLKRPTRGSIS 79 + RVF D S A+ +IS + GEFI ++GPSGCGK+T +++A GL+ T G I+ Sbjct: 22 NVSRVFSKKEDESGTEALHNISFDVQDGEFICLLGPSGCGKTTLLRIAAGLETLTSGEIT 81 Query: 80 IAGADVTGPLKFVGMAFQAPTLLPWRTTLDNVLLPLEIVEPYRRDFKKNKAQYAERALKL 139 + G +TGP GM FQ +L PWRT +DN+ LE+ + KK++A+ ++ K Sbjct: 82 LNGVPITGPDPKRGMVFQQYSLFPWRTVIDNITFGLEM-----QGIKKSEAR--KQVEKY 134 Query: 140 LKTVGLDGYADKFPWELSGGMQQRASICRALIHEPRMLLLDEPFGALDAFTREELWCVLR 199 L+ VGL + + +P ELSGGMQQRA+I RAL +EP +LL+DEPFGALDA TR L L Sbjct: 135 LELVGLGQFKNSYPHELSGGMQQRAAIARALANEPEVLLMDEPFGALDAQTRNVLQDELL 194 Query: 200 DLWTERKFNVILVTHDLREAAFLADTIYVMSKRPGRIVARKENPLPRPRELELTYTDPFN 259 +W ++ + VTH + EA FL+D I VM+ RPGR+ LPRPR + T P Sbjct: 195 KIWEQKHVTFLFVTHSVDEAVFLSDRIVVMTSRPGRVKEIVSVELPRPR----SRTSP-- 248 Query: 260 ALVHELREHI 269 V+ LR+H+ Sbjct: 249 -EVNRLRDHV 257 >AGc4331 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 264 Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 106/258 (41%), Positives = 151/258 (58%), Gaps = 11/258 (4%) Query: 14 ASADTFIDFRRVFLSYDGSDE--FAVEDISLQTKQGEFIAIVGPSGCGKSTFMKLATGLK 71 AS + + R++ L+++ D A+ D+ L K+G+F++ +GPSGCGK+TF+++ L+ Sbjct: 4 ASPYSVVSARKLGLTFETGDGPVHALSDVDLDVKKGDFVSFIGPSGCGKTTFLRVIADLE 63 Query: 72 RPTRGSISIAGADVTGPLK--FVGMAFQAPTLLPWRTTLDNVLLPLEIVEPYRRDFKKNK 129 + T G I++ G K G FQA L PWR+ N+ LPLEI+ +K Sbjct: 64 KHTSGEITVNGTTPENARKDRSYGYVFQAAALYPWRSIEKNIALPLEIM-------GYSK 116 Query: 130 AQYAERALKLLKTVGLDGYADKFPWELSGGMQQRASICRALIHEPRMLLLDEPFGALDAF 189 A+ ER + + V L G+ K+PW+LSGGMQQRASI RAL + +LL+DEPFGALD Sbjct: 117 AEQRERIDRTMDLVNLTGFGKKYPWQLSGGMQQRASIARALAFDADLLLMDEPFGALDEI 176 Query: 190 TREELWCVLRDLWTERKFNVILVTHDLREAAFLADTIYVMSKRPGRIVARKENPLPRPRE 249 R+ L L LW + VTH + EA +L+ I VMS RPGR+ E+ LPR R Sbjct: 177 VRDHLNEQLLKLWDTTGKTICFVTHSIPEAVYLSTRIVVMSPRPGRVTDVIESTLPRERP 236 Query: 250 LELTYTDPFNALVHELRE 267 LE+ T F A+ H +RE Sbjct: 237 LEIRETPEFLAIAHRVRE 254 >AGl1027GM [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 269 Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 103/215 (47%), Positives = 140/215 (65%), Gaps = 7/215 (3%) Query: 36 AVEDISLQTKQGEFIAIVGPSGCGKSTFMKLATGLKRPTRGSISIAGADVTGPLKFVGMA 95 A+E + L GEF+AIVGPSGCGKST M+L + L + + G IS+ G P + + + Sbjct: 33 ALEKLDLTIGGGEFVAIVGPSGCGKSTMMRLISRLSQASTGQISVFGDVSKDPPRGMSIV 92 Query: 96 FQAPTLLPWRTTLDNVLLPLEIVEPYRRDFKKNKAQYAERALKLLKTVGLDGYADKFPWE 155 FQ LL WRT +DNVL P E+ +N+ + AL LL++VGL +A+++P E Sbjct: 93 FQNHVLLAWRTIIDNVLFPAEMT-------GRNREELRPHALALLESVGLKDFANRYPHE 145 Query: 156 LSGGMQQRASICRALIHEPRMLLLDEPFGALDAFTREELWCVLRDLWTERKFNVILVTHD 215 LSGGM+QRASI RAL+ +PR+LL+DEPFGALDA TRE++ L LW + + V+ +TH Sbjct: 146 LSGGMKQRASIARALLLQPRLLLMDEPFGALDALTREQMRIDLEALWLKNRMTVVFITHS 205 Query: 216 LREAAFLADTIYVMSKRPGRIVARKENPLPRPREL 250 + EA LAD + VM+ RPGRI E +PRPR L Sbjct: 206 IDEAVLLADRVIVMTPRPGRIEKVLEIDMPRPRGL 240