BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0627.p (260 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc2566 [ET] COG0834 ABC-type amino acid transport/signal transd... 345 9e-95 RSc2103 [ET] COG0834 ABC-type amino acid transport/signal transd... 300 2e-81 YPO3257 [ET] COG0834 ABC-type amino acid transport/signal transd... 299 5e-81 mlr4897 [ET] COG0834 ABC-type amino acid transport/signal transd... 207 2e-53 SMa0082 [ET] COG0834 ABC-type amino acid transport/signal transd... 198 1e-50 >AGc2566 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 261 Score = 345 bits (884), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 171/256 (66%), Positives = 205/256 (80%), Gaps = 1/256 (0%) Query: 6 LLLGLMAGALLISTS-VARADALDDIQKAGVLRVAVPQDFPPFGSVTADLKPQGLDIDVA 64 LLL + A ++ + S A ADAL DI G +RVAVPQDFPPFGSV D+ PQG DIDVA Sbjct: 6 LLLAIAAVSVTLGFSPAAFADALGDISSRGTIRVAVPQDFPPFGSVGTDMAPQGYDIDVA 65 Query: 65 SLIAKKLGVKVELIPVTSANRVPYLQTRKVDLVISSMGKNAEREKVIDFTAAYAPFFNGV 124 +LI +KLGVKVEL+PVTSANRVPYLQT KVDLVISS+GKN +REKVIDF+ AYAPFFNGV Sbjct: 66 NLIGEKLGVKVELVPVTSANRVPYLQTNKVDLVISSLGKNPDREKVIDFSTAYAPFFNGV 125 Query: 125 FGPADQKVSGPADLAGKTIGVTRGSVEDLELSKIVPASATVKRYEDNNGTISSFLSNQVQ 184 F P V+ DL+GKTIGVTRG+VEDLEL+K+ PA T+KRYEDNNGTIS+FL+ QV+ Sbjct: 126 FAPDSVTVAKAEDLSGKTIGVTRGAVEDLELTKVAPADTTIKRYEDNNGTISAFLAGQVE 185 Query: 185 LVATGNVIAAAIIAKNPPKKPETKFLIKDSPCFIGLNKDEKKLQDKVNAVLAEIKKNGEL 244 VATGNV+AAAI+AKNPPK+PE KFLIK+SPC+IGLNK++ L +KVNA++A K +G L Sbjct: 186 AVATGNVVAAAILAKNPPKRPELKFLIKNSPCYIGLNKEQPALLEKVNAIIATAKTDGSL 245 Query: 245 SALTVKWLGLPLPATL 260 + + KWL LP L Sbjct: 246 NTIAQKWLKTDLPKDL 261 >RSc2103 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Rso Ralstonia solanacearum Length = 267 Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 143/239 (59%), Positives = 185/239 (77%) Query: 22 ARADALDDIQKAGVLRVAVPQDFPPFGSVTADLKPQGLDIDVASLIAKKLGVKVELIPVT 81 A ADAL +IQKAGV+RVA+P DFPPFGS+ DLK QG DID+A+L+AK+LGVK EL+PVT Sbjct: 29 AHADALANIQKAGVIRVAIPNDFPPFGSLGTDLKLQGYDIDMANLVAKELGVKAELVPVT 88 Query: 82 SANRVPYLQTRKVDLVISSMGKNAEREKVIDFTAAYAPFFNGVFGPADQKVSGPADLAGK 141 S NR+P+L T KVD+VISS+GKNAER KVIDFT AYAPF V+GP D + PADLAGK Sbjct: 89 STNRIPFLTTGKVDVVISSLGKNAERAKVIDFTQAYAPFPKSVYGPKDVSIKTPADLAGK 148 Query: 142 TIGVTRGSVEDLELSKIVPASATVKRYEDNNGTISSFLSNQVQLVATGNVIAAAIIAKNP 201 TIGVTRGS EDL L+ + PASAT+KRYEDNN T S+L QVQLV GN++A A+ + Sbjct: 149 TIGVTRGSTEDLALTAVAPASATIKRYEDNNATAQSYLIGQVQLVTLGNIVANAVNERTR 208 Query: 202 PKKPETKFLIKDSPCFIGLNKDEKKLQDKVNAVLAEIKKNGELSALTVKWLGLPLPATL 260 ++ + KF ++D+PC++G+ K E L +KVNA + ++K +G L+ L+ +W+ +PLPA L Sbjct: 209 LRQLDVKFPVEDTPCYVGVAKGEPALLEKVNAAITKLKSDGRLNDLSQRWIKMPLPAKL 267 >YPO3257 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Ype Yersinia pestis Length = 262 Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 145/260 (55%), Positives = 192/260 (73%) Query: 1 MKLSTLLLGLMAGALLISTSVARADALDDIQKAGVLRVAVPQDFPPFGSVTADLKPQGLD 60 M + +L L A +L+ AD L+ IQ+ GVLRVAVPQDFPPFGSV DL+PQG D Sbjct: 1 MNIKKRMLWLWAVLVLVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 60 Query: 61 IDVASLIAKKLGVKVELIPVTSANRVPYLQTRKVDLVISSMGKNAEREKVIDFTAAYAPF 120 ID+A +A K+ +K++L+ VTSANRVPYLQT KVDLVISS+GKN EREK I F+ AYAPF Sbjct: 61 IDMAQYLADKMKLKLQLVSVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYAPF 120 Query: 121 FNGVFGPADQKVSGPADLAGKTIGVTRGSVEDLELSKIVPASATVKRYEDNNGTISSFLS 180 F GVFG D ++ P LAGKTIGVTRG+VED+ LS+I P +A ++RYEDNN T+S++LS Sbjct: 121 FLGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAPKAAQIRRYEDNNTTLSAYLS 180 Query: 181 NQVQLVATGNVIAAAIIAKNPPKKPETKFLIKDSPCFIGLNKDEKKLQDKVNAVLAEIKK 240 QV +ATGN++ +A+ +NP + P KF++KDSPC+IGL + E L+ KV+A++ + + Sbjct: 181 GQVNYLATGNLVISALARQNPKQAPVAKFMLKDSPCYIGLRQGEPALKAKVDALIGDALQ 240 Query: 241 NGELSALTVKWLGLPLPATL 260 + L+ L+ KWL PLPA L Sbjct: 241 DNTLNGLSEKWLKAPLPADL 260 >mlr4897 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Mlo Mesorhizobium loti Length = 269 Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 117/250 (46%), Positives = 160/250 (64%), Gaps = 1/250 (0%) Query: 7 LLGLMAGALLISTSVARADALDDIQKAGVLRVAVPQDFPPFGSVTADLKPQGLDIDVASL 66 +L L A L I+T A ADAL DI KAG + V V DFPPF S +AD+ +G D+DVA Sbjct: 14 ILVLGAAGLGIATQAANADALADITKAGTINVGVFADFPPFSSASADMSLKGYDMDVAQY 73 Query: 67 IAKKLGVKVELIPVTSANRVPYLQTRKVDLVISSMGKNAEREKVIDFTAAYAPFFNGVFG 126 IA L VK+ + VT NR+PYL +VD+++S +G + ERE+VIDF AAYAP++ V G Sbjct: 74 IADTLKVKLNPVAVTGQNRIPYLNDHRVDILMS-VGYSKEREQVIDFAAAYAPYYIAVIG 132 Query: 127 PADQKVSGPADLAGKTIGVTRGSVEDLELSKIVPASATVKRYEDNNGTISSFLSNQVQLV 186 PA V G DLA K+I V RG++ED L++ PASA +KR+++ N I +F+S Q QL+ Sbjct: 133 PAAMSVKGKEDLADKSIAVNRGTLEDTSLTEAAPASADIKRFDNYNSVIQAFISGQTQLM 192 Query: 187 ATGNVIAAAIIAKNPPKKPETKFLIKDSPCFIGLNKDEKKLQDKVNAVLAEIKKNGELSA 246 GN + A ++AK KPE KF + SP IGLNK+E L+ VN +A++ +G+L Sbjct: 193 VVGNDVGAQVLAKQDVLKPEQKFQLLTSPSHIGLNKNEDGLKKAVNDAIAKMLADGKLDE 252 Query: 247 LTVKWLGLPL 256 + WL PL Sbjct: 253 SSKAWLKTPL 262 >SMa0082 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Sme Sinorhizobium meliloti Length = 271 Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 108/259 (41%), Positives = 161/259 (62%), Gaps = 3/259 (1%) Query: 1 MKLSTLLLGLMAGALLISTSVARADA--LDDIQKAGVLRVAVPQDFPPFGSVTADLKPQG 58 M +S + + GA +++ VA A A ++ I+ AG ++V + DFPPFG + A+ +P G Sbjct: 7 MNISRRIAISVLGAAIVAGLVAPAAAQTVETIKSAGTVKVGMLVDFPPFGIMDANNQPDG 66 Query: 59 LDIDVASLIAKKLGVKVELIPVTSANRVPYLQTRKVDLVISSMGKNAEREKVIDFTAAYA 118 D DVA L+AK+LGV+V ++PVT NR+PYLQ+ +VDL+++S+G ER K +DF+ YA Sbjct: 67 YDADVAKLLAKELGVEVTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAKNVDFSQPYA 126 Query: 119 PFFNGVFGPADQKVSGPADLAGKTIGVTRGSVEDLELSKIVPASATVKRYEDNNGTISSF 178 GVFG AD V+ P DLAGKTIGV R S +D +KI P A ++R++D+ + + Sbjct: 127 GISIGVFGAADLAVTKPEDLAGKTIGVARASTQDTATTKIAPQDANIQRFDDDASAVQAL 186 Query: 179 LSNQVQLVATGNVIAAAIIAKNPPKKPETKFLIKDSPCFIGLNKDEKKLQDKVNAVLAEI 238 LS QV+L+ NV+AA I A P + K + I + K ++ VN L ++ Sbjct: 187 LSGQVELIGVSNVVAAQIEAA-APGRFNQKLQLSQQVQGIAVRKGSSEMLKFVNGFLDKV 245 Query: 239 KKNGELSALTVKWLGLPLP 257 K +G+L+A+ KWLG PLP Sbjct: 246 KADGQLNAIHEKWLGSPLP 264