BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0614.p         (181 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2494 [S] COG1430 Uncharacterized conserved protein Rso Ralsto...   140   2e-33
AGc3316 [S] COG1430 Uncharacterized conserved protein Atu Agroba...    87   2e-17
SMc00288 [S] COG1430 Uncharacterized conserved protein Sme Sinor...    85   9e-17
TM1668 [S] COG1430 Uncharacterized conserved protein Tma Thermot...    79   6e-15
CC1388 [S] COG1430 Uncharacterized conserved protein Ccr Cauloba...    74   2e-13

>RSc2494 [S] COG1430 Uncharacterized conserved protein Rso Ralstonia
           solanacearum
          Length = 150

 Score =  140 bits (353), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/147 (49%), Positives = 89/147 (60%), Gaps = 4/147 (2%)

Query: 39  LVTLLATLATVAAALPGQAQQLQK----FPTTTLNAGLYLIKAEVASTEAQREQGLMFRD 94
           L  LLA L+   AA    AQ         PT  L  G+Y +  EVA+T+  RE GLMFR 
Sbjct: 4   LSRLLAGLSLAVAATGALAQTPTGPNTGLPTVDLTIGMYKVHTEVAATQPARETGLMFRK 63

Query: 95  KMGANDGMVFAFGAPAGVCMWMKNTLIPLSVAFMDESGKIINIEEMKEQTLDSHCAAKPA 154
            M    GM+F F   A  C WMKNT +PLS+AF+D++G I +I EMK QT D+HC  +P 
Sbjct: 64  SMPDTAGMLFVFDESARHCFWMKNTDLPLSIAFIDDNGVITDIAEMKPQTEDNHCPTRPG 123

Query: 155 TYALEMNKGWFKQKNIKPGTVIEGLPR 181
            YALEMNKGWF +K IK GT +  LPR
Sbjct: 124 LYALEMNKGWFTRKGIKVGTKVGSLPR 150


>AGc3316 [S] COG1430 Uncharacterized conserved protein Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 161

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 9/153 (5%)

Query: 32  IMRRFRPLVTLLATLATVAAALPG--QAQQLQKFPTTTLNAGLYLIK-----AEVASTEA 84
           +M   RP++   A +A V   L G  Q+Q+ Q F +  L       K     AE+A  +A
Sbjct: 1   MMSGLRPMLKG-AVMALVFFTLAGAAQSQERQTFTSEPLTIETTSGKTQDFVAELALDDA 59

Query: 85  QREQGLMFRDKMGANDGMVFAFGAPAGVCMWMKNTLIPLSVAFMDESGKIINIEEMKEQT 144
           QR QGLMFR  M   +GM+F FG    V MWM+NTLIPL + F+   G+I +I E     
Sbjct: 60  QRSQGLMFRKSMPPENGMLFDFGETRAVAMWMRNTLIPLDMLFIAGDGRITHIHENAVPH 119

Query: 145 LDSHCAAK-PATYALEMNKGWFKQKNIKPGTVI 176
            ++  +++ P  + LE+N G  K+  IKPG ++
Sbjct: 120 SEAIISSRGPVKFVLELNGGAAKRYGIKPGDMV 152


>SMc00288 [S] COG1430 Uncharacterized conserved protein Sme Sinorhizobium
           meliloti
          Length = 163

 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 44/108 (40%), Positives = 60/108 (55%), Gaps = 7/108 (6%)

Query: 75  IKAEVASTEAQREQGLMFRDKMGANDGMVFAFGAPAGVCMWMKNTLIPLSVAFMDESGKI 134
           +  E+A   +QREQGLM+R +M  + GM+F FG    V MWMKNT +PL + F+   G I
Sbjct: 49  LTVELAVDPSQREQGLMYRRQMAPDHGMLFDFGETRPVMMWMKNTYLPLDMLFIASDGTI 108

Query: 135 INIEE----MKEQTLDSHCAAKPATYALEMNKGWFKQKNIKPGTVIEG 178
             I E      E  +DS    +P  Y LE+N G  K+  + PG  +EG
Sbjct: 109 RTIHENAVPHSEAIIDSR---EPVAYVLELNAGTVKRLGVSPGDRLEG 153


>TM1668 [S] COG1430 Uncharacterized conserved protein Tma Thermotoga
           maritima
          Length = 163

 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 3/105 (2%)

Query: 75  IKAEVASTEAQREQGLMFRDKMGANDGMVFAFGAPAGVCMWMKNTLIPLSVAFMDESGKI 134
           +  E+A+T A R  GLM+R  +  + GM+F F        WMKNT +PL +AF+D++G I
Sbjct: 55  LDVEIANTPALRSIGLMYRKSIPDDFGMLFVFEEDTCSGFWMKNTYVPLEIAFIDKNGVI 114

Query: 135 INIEEM---KEQTLDSHCAAKPATYALEMNKGWFKQKNIKPGTVI 176
            +I+EM   KE+    + A  P  YALE+ KG+F++     G+ +
Sbjct: 115 FSIQEMEPCKEEPCKIYYAPGPFRYALEVKKGFFERHRFGVGSRV 159


>CC1388 [S] COG1430 Uncharacterized conserved protein Ccr Caulobacter
           vibrioides
          Length = 184

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 1/102 (0%)

Query: 76  KAEVASTEAQREQGLMFRDKMGANDGMVFAFGAPAGVCMWMKNTLIPLSVAFMDESGKII 135
           + E+A+T+A++E+GLMFR  +  + GM+F +  P  V  WMKNTLIPL + ++   G+++
Sbjct: 76  QVEIAATKAEQERGLMFRKSLAPDRGMLFTYKRPQPVAYWMKNTLIPLDILYIQADGRVL 135

Query: 136 NI-EEMKEQTLDSHCAAKPATYALEMNKGWFKQKNIKPGTVI 176
           +I    +   L    +  P    LE+  G   Q  I PG  +
Sbjct: 136 SIARNARPHDLTPLASGGPVLGVLEIAGGRAAQLGILPGDRV 177