BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0549.p         (362 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0299 Non COG                                                       115   2e-25

>RSc0299 Non COG
          Length = 355

 Score =  115 bits (287), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 109/219 (49%), Gaps = 17/219 (7%)

Query: 148 PPSAELEYDVLAFSDNLTWHGTSTLDWKTDGSRYTVDGEVYTRLFAKIAFLNFTSSGEIG 207
           PPSA L Y   A   N   +    + W TDG  YT+  E+   LF     L F S+G + 
Sbjct: 128 PPSATLHY---ATYVNGVRNENGMIRWATDGKTYTLAVEIPLPLF--FGALAFRSTGNVD 182

Query: 208 AFGVEPELYTEKKRNRPATNTHFNRERN-----------LVSFSASTTNYPRAGGEQDRA 256
           AFG+ P  Y E +  R    T F+R  +           +++F+ S +  P   G QDR 
Sbjct: 183 AFGLAPLRYEEVRGRRQPDVTTFHRTVDPAPASGTPGSPVITFTRSPSVLPLPNGVQDRF 242

Query: 257 SLIWQLAAIGRGDSAKFAP-GAVIDMFVAGVRDGEVWRMQVVGQEEIRLITGAAQVWHVV 315
           S+  QL  +GRG+ ++ A  G  +DM +A     E+ R+Q VG++ +    GA +  H V
Sbjct: 243 SVFLQLTGLGRGNPSRLASQGVTLDMPIADTDSVELARVQRVGEDMVDTPDGAVRAEHFV 302

Query: 316 RQPRPGSYEQRLDIWLEPGRQWYPARLRFTETNGDYLEL 354
           R PR     +R++IWL P R W P RLR TE +G   EL
Sbjct: 303 RLPRREGDARRVEIWLAPERGWLPVRLRQTEPSGMQFEL 341