BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0540.p (264 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1738 [R] COG1101 ABC-type uncharacterized transport system, A... 431 e-120 PA3838 [R] COG1101 ABC-type uncharacterized transport system, AT... 396 e-110 VC1103 [R] COG1101 ABC-type uncharacterized transport system, AT... 345 6e-95 AGc4841 [R] COG1101 ABC-type uncharacterized transport system, A... 328 1e-89 SMc03828 [R] COG1101 ABC-type uncharacterized transport system, ... 317 2e-86 >RSc1738 [R] COG1101 ABC-type uncharacterized transport system, ATPase component Rso Ralstonia solanacearum Length = 264 Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust. Identities = 213/264 (80%), Positives = 230/264 (87%) Query: 1 MLKAKELKITFNPGTPIENPALRGLNLEIPTGQFVAVIGSNGAGKSTFLNAISGDLLVDT 60 ML A+ L +TFN GTPIE ALRGL+LEIPTGQFV VIGSNGAGKSTFLN+ISGD +VD Sbjct: 1 MLSAQGLTLTFNAGTPIETRALRGLSLEIPTGQFVTVIGSNGAGKSTFLNSISGDQMVDA 60 Query: 61 GSVEIDGVDVTRKQAWDRAGMVARVFQDPMAGTCEALTIEENMALAMARGKRRGFGFAIK 120 G + IDG+DVTRK AW RA +VARVFQDPMAGTCE LTIEENM+LAM RG+RRGFGFA Sbjct: 61 GRITIDGIDVTRKTAWQRANLVARVFQDPMAGTCENLTIEENMSLAMCRGQRRGFGFATN 120 Query: 121 RNMRELFREKLSILNLGLEKRLTDRIGLLSGGQRQAVSLLMASLQPSRILLLDEHTAALD 180 R RE+FR +L L+LGLE RLTDRIGLLSGGQRQAVSLLMASLQPSRILLLDEHTAALD Sbjct: 121 RKWREVFRAQLRRLDLGLENRLTDRIGLLSGGQRQAVSLLMASLQPSRILLLDEHTAALD 180 Query: 181 PKTAAFVLELTAKIVTESKLTTMMVTHSMRQALDYGDRTVMLHQGQVVLDVSGEERAGLD 240 PKTAAFVLELTAKIV+ESKLTTMMVTHSMRQALDYG RTVMLHQG V+LDV G ERAGLD Sbjct: 181 PKTAAFVLELTAKIVSESKLTTMMVTHSMRQALDYGQRTVMLHQGNVILDVQGGERAGLD 240 Query: 241 VPDLLKMFERTRGEVLSDDALLLG 264 VP LL+ FE TRG + DDALLLG Sbjct: 241 VPHLLQKFEETRGAKVDDDALLLG 264 >PA3838 [R] COG1101 ABC-type uncharacterized transport system, ATPase component Pae Pseudomonas aeruginosa Length = 264 Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/264 (78%), Positives = 225/264 (85%) Query: 1 MLKAKELKITFNPGTPIENPALRGLNLEIPTGQFVAVIGSNGAGKSTFLNAISGDLLVDT 60 ML AK LKITFNPGTPIE ALRGL+L+IP GQFV VIGSNGAGKSTFLNA+SGDL +D+ Sbjct: 1 MLSAKNLKITFNPGTPIETRALRGLSLDIPAGQFVTVIGSNGAGKSTFLNAVSGDLPIDS 60 Query: 61 GSVEIDGVDVTRKQAWDRAGMVARVFQDPMAGTCEALTIEENMALAMARGKRRGFGFAIK 120 G + ID DVTRK W RA VARVFQDPMAGTCE LTIEENMALA RG RG G A++ Sbjct: 61 GQILIDDEDVTRKPVWARANRVARVFQDPMAGTCEDLTIEENMALAQRRGAGRGLGRAVQ 120 Query: 121 RNMRELFREKLSILNLGLEKRLTDRIGLLSGGQRQAVSLLMASLQPSRILLLDEHTAALD 180 +MR+ FRE L+ L LGLE RL DRIGLLSGGQRQAVSLLMA+LQPSRILLLDEHTAALD Sbjct: 121 ASMRDGFRESLATLGLGLENRLGDRIGLLSGGQRQAVSLLMAALQPSRILLLDEHTAALD 180 Query: 181 PKTAAFVLELTAKIVTESKLTTMMVTHSMRQALDYGDRTVMLHQGQVVLDVSGEERAGLD 240 P+TA FVL LTA+IV E KLTTMMVTHSMRQALD G+RTVMLHQGQVVLDVSGE+R GLD Sbjct: 181 PRTADFVLHLTARIVAEKKLTTMMVTHSMRQALDVGERTVMLHQGQVVLDVSGEQRKGLD 240 Query: 241 VPDLLKMFERTRGEVLSDDALLLG 264 VPDLL MFE+ RGE L+DDALLLG Sbjct: 241 VPDLLAMFEKVRGEKLADDALLLG 264 >VC1103 [R] COG1101 ABC-type uncharacterized transport system, ATPase component Vch Vibrio cholerae Length = 264 Score = 345 bits (885), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 167/263 (63%), Positives = 213/263 (80%) Query: 1 MLKAKELKITFNPGTPIENPALRGLNLEIPTGQFVAVIGSNGAGKSTFLNAISGDLLVDT 60 M++ +++++TFNPGT +EN ALRG++LE+P QF+ VIGSNGAGKST L A++G+ + Sbjct: 1 MIRLQDIQVTFNPGTILENRALRGVSLEVPEHQFLTVIGSNGAGKSTLLGAVTGETPIVG 60 Query: 61 GSVEIDGVDVTRKQAWDRAGMVARVFQDPMAGTCEALTIEENMALAMARGKRRGFGFAIK 120 G V ID +DVT++ RA + ARVFQDP+AGTC ALTIEENMALA RGK+RG+ A+ Sbjct: 61 GQVLIDEIDVTKQSVDQRANLCARVFQDPLAGTCGALTIEENMALAYMRGKKRGWSLALS 120 Query: 121 RNMRELFREKLSILNLGLEKRLTDRIGLLSGGQRQAVSLLMASLQPSRILLLDEHTAALD 180 R+LF+E++SIL LGLE RL D IGLLSGGQRQAVSL+MA+L S++LLLDEHTAALD Sbjct: 121 NQRRKLFQERISILGLGLEDRLGDNIGLLSGGQRQAVSLVMATLSESKLLLLDEHTAALD 180 Query: 181 PKTAAFVLELTAKIVTESKLTTMMVTHSMRQALDYGDRTVMLHQGQVVLDVSGEERAGLD 240 P+ AAF+++LT KIV E LT MMVTHSM+ AL GDRTVMLHQGQ+VLDV+GE+RA + Sbjct: 181 PRMAAFIIDLTKKIVKEFNLTVMMVTHSMKDALACGDRTVMLHQGQIVLDVTGEQRANMG 240 Query: 241 VPDLLKMFERTRGEVLSDDALLL 263 VP+LL+MF + RGE L+DD+LLL Sbjct: 241 VPELLEMFSKVRGEELADDSLLL 263 >AGc4841 [R] COG1101 ABC-type uncharacterized transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 264 Score = 328 bits (840), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 162/264 (61%), Positives = 202/264 (76%) Query: 1 MLKAKELKITFNPGTPIENPALRGLNLEIPTGQFVAVIGSNGAGKSTFLNAISGDLLVDT 60 M+ ++++ F GTP++ AL ++L I G FV VIGSNGAGKST L ++GD+L Sbjct: 1 MISLSDIQVVFGRGTPLQKQALAKIDLTIEDGSFVTVIGSNGAGKSTLLGVLAGDVLPTA 60 Query: 61 GSVEIDGVDVTRKQAWDRAGMVARVFQDPMAGTCEALTIEENMALAMARGKRRGFGFAIK 120 G V I G DVTRK RAG VARVFQDP+AG+C ALTIEEN+ALA +RG+RRG A+ Sbjct: 61 GKVMIGGADVTRKPTASRAGRVARVFQDPLAGSCGALTIEENLALAASRGERRGLSSALG 120 Query: 121 RNMRELFREKLSILNLGLEKRLTDRIGLLSGGQRQAVSLLMASLQPSRILLLDEHTAALD 180 R R+ FRE+++ LNLGLE RL DR+ LLSGGQRQAVSL+MA+L S +LLLDEHTAALD Sbjct: 121 RGRRDFFRERIASLNLGLENRLKDRMDLLSGGQRQAVSLVMATLSGSDVLLLDEHTAALD 180 Query: 181 PKTAAFVLELTAKIVTESKLTTMMVTHSMRQALDYGDRTVMLHQGQVVLDVSGEERAGLD 240 P A FV+ELT K+V+E KLTT+MVTHSMRQALDYG RT+MLH G++VLDVSG+ R L+ Sbjct: 181 PGMAEFVMELTRKVVSERKLTTLMVTHSMRQALDYGTRTIMLHAGEIVLDVSGDSRKDLE 240 Query: 241 VPDLLKMFERTRGEVLSDDALLLG 264 V DL++MF + RG+ L DD LL+G Sbjct: 241 VEDLIEMFRKIRGQTLDDDELLIG 264 >SMc03828 [R] COG1101 ABC-type uncharacterized transport system, ATPase component Sme Sinorhizobium meliloti Length = 264 Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 158/264 (59%), Positives = 198/264 (75%) Query: 1 MLKAKELKITFNPGTPIENPALRGLNLEIPTGQFVAVIGSNGAGKSTFLNAISGDLLVDT 60 M+ + +++ F GTP++ AL G++L I G FV VIGSNGAGKST L ++GD+L Sbjct: 1 MINVENIQVVFGKGTPLQKQALNGVSLTIEEGSFVTVIGSNGAGKSTLLGVLAGDVLPSG 60 Query: 61 GSVEIDGVDVTRKQAWDRAGMVARVFQDPMAGTCEALTIEENMALAMARGKRRGFGFAIK 120 G V I DVTRK RAG+VARVFQDP+AG+C AL+IEEN+ALA RG+ RG A+ Sbjct: 61 GRVTIGTTDVTRKGTAARAGLVARVFQDPLAGSCGALSIEENLALAARRGESRGLTPALG 120 Query: 121 RNMRELFREKLSILNLGLEKRLTDRIGLLSGGQRQAVSLLMASLQPSRILLLDEHTAALD 180 RE FRE+++ LNLGLE R+ DR+ LLSGGQRQAVSL+MA+L S +LLLDEHTAALD Sbjct: 121 SKRREHFRERIAELNLGLENRMRDRMDLLSGGQRQAVSLVMATLAGSEVLLLDEHTAALD 180 Query: 181 PKTAAFVLELTAKIVTESKLTTMMVTHSMRQALDYGDRTVMLHQGQVVLDVSGEERAGLD 240 P A F++ LT KIV+E KLTT+MVTHSMRQALD+G RT+MLH G++VLDV+G+ R L Sbjct: 181 PGMAEFIMNLTQKIVSERKLTTLMVTHSMRQALDFGHRTIMLHGGEIVLDVAGDSRKTLQ 240 Query: 241 VPDLLKMFERTRGEVLSDDALLLG 264 V DL+ MF R RG+ L DDALL+G Sbjct: 241 VEDLIAMFRRIRGQTLDDDALLIG 264