BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0505.p         (205 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA2602 [R] COG5553 Predicted metal-dependent enzyme of the doubl...   233   2e-61
alr2518 [R] COG5553 Predicted metal-dependent enzyme of the doub...    66   4e-11

>PA2602 [R] COG5553 Predicted metal-dependent enzyme of the double-stranded
           beta helix superfamily Pae Pseudomonas aeruginosa
          Length = 201

 Score =  233 bits (594), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 120/197 (60%), Positives = 139/197 (70%), Gaps = 6/197 (3%)

Query: 6   RLRHFITSFSDLLGRESAEAAILHDGAELLRDLVAVDDWLPEAYAQPDPERYRQYLLHVD 65
           RLR FI   + LL     E+ +L     LL +LV  DDWLPE  A+PDP+RY+QYLLHVD
Sbjct: 9   RLRQFIGELATLLDSRPDESTLLAQAHPLLAELVHQDDWLPEDCARPDPQRYQQYLLHVD 68

Query: 66  SAQRFSVVSFVWGPGQQTPVHDHTVWGLIGMLRGSEYSQSYRWDEGDGKRSLAPHGEPIQ 125
           S QRFSVVSFVWGPGQ TPVHDH VWGLIGMLRG+EYSQ Y +D G       P G   +
Sbjct: 69  SRQRFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPH---PSGARRR 125

Query: 126 LTPGMVEPISPNVDGLDDIHRVHNAHADRVSISVHVYGANIGAVHRSVYQPDGTRKAFIS 185
           L PG VE +SP +    D+H+V NA +DR SIS+HVYGANIGAV R+V+  +G  K FIS
Sbjct: 126 LEPGEVEALSPRI---GDVHQVSNAFSDRTSISIHVYGANIGAVRRAVFSAEGEEKPFIS 182

Query: 186 GYSNDTLPNIWDLSKET 202
           GYSN  LPNIWDLSKE 
Sbjct: 183 GYSNSRLPNIWDLSKEN 199


>alr2518 [R] COG5553 Predicted metal-dependent enzyme of the double-stranded
           beta helix superfamily Nos Nostoc sp. PCC 7120
          Length = 203

 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 9/165 (5%)

Query: 1   MPNHQRLRHFITSFSDLLGRESAEAAILHDGAELLRDLVAVDDWLPEAYAQPDPERYRQY 60
           +  + RL  F+T   D+L + S E+  L +   L+R L+    W+   Y  P P      
Sbjct: 26  LQENYRLYRFLTEMEDVLNQVSDESTRLPEIRMLVRRLIVNSYWVRSQYLAPSPTTGTSV 85

Query: 61  LLHVDSAQR-FSVVSFVWGPGQQTPVHDHTVWGLIGMLRGSEYSQSYRWDEG-DGKRSLA 118
           LL  D      +V +  + PG  + +H+H  WG++ +L+G E +  +R  +  D +  + 
Sbjct: 86  LLLYDELGFPLTVQTVTFAPGTLSTIHNHGTWGVVAVLKGQEKNTVWRHTKTPDSQDKIE 145

Query: 119 PHGEPIQLTPGMVEPISPNVDGLDDIHRVHNAHADRVSISVHVYG 163
             GE I L+PG +   +P     D IH V  A  D  +++ ++YG
Sbjct: 146 AMGE-ITLSPGDMISFTP-----DAIHSVQ-AIGDEPTVTFNIYG 183