BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0504.p         (301 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA2603 [P] COG0607 Rhodanese-related sulfurtransferase Pae Pseud...   334   1e-91
AGpTbx104 [P] COG0607 Rhodanese-related sulfurtransferase Atu Ag...   303   3e-82

>PA2603 [P] COG0607 Rhodanese-related sulfurtransferase Pae Pseudomonas
           aeruginosa
          Length = 527

 Score =  334 bits (857), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 173/235 (73%), Positives = 200/235 (85%)

Query: 10  VDTRNFQQVRDDLLARREIALLDVREEAPHAEAHPLFASNLSFSHLELLAYARIPRRDTA 69
           +  R F  +R  LLARRE+ALLDVREE P A+AHPLFA+NL  S LEL  +AR+PRRDT 
Sbjct: 4   IAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLSRLELEIHARVPRRDTP 63

Query: 70  IVVLDDGEGLAQKATGRFVALGYSNVSVLDGGVAGWKAAGGELFQDVNVPSKSFGELVES 129
           I V DDGEGLA  A  R + LGYS+V++LDGG++GW+ AGGELF+DVNVPSK+FGELVE+
Sbjct: 64  ITVYDDGEGLAPVAAQRLLDLGYSDVALLDGGLSGWRNAGGELFRDVNVPSKAFGELVEA 123

Query: 130 KRHTPSLSAPEVKALLDAKENVVVLDARRFDEYQNMNIPTSISVPGAELVLRVRELAPDP 189
           +RHTPSL+A EV+ALLDA+   V+LDARRFDEYQ M+IP  ISVPGAELVLRV ELAPDP
Sbjct: 124 ERHTPSLAAEEVQALLDARAEAVILDARRFDEYQTMSIPGGISVPGAELVLRVAELAPDP 183

Query: 190 NTRVIVNCAGRTRSIIGTQSLVNAGIPNPVHALRNGTIGWTLAGQELEHGNSRQF 244
            TRVIVNCAGRTRSIIGTQSL+NAGIPNPV ALRNGTIGWTLAGQ+LEHG +R+F
Sbjct: 184 RTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTIGWTLAGQQLEHGQTRRF 238


>AGpTbx104 [P] COG0607 Rhodanese-related sulfurtransferase Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 395

 Score =  303 bits (777), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 156/240 (65%), Positives = 178/240 (74%), Gaps = 2/240 (0%)

Query: 7   PIGVDTRNFQQVRDDLLARREIALLDVREEAPHAEAHPLFASNLSFSHLELLAYARIPRR 66
           PI   +  + +VR  LLAR EI L DVREE P A+ HPL+A+N   + LEL A+ RIP+R
Sbjct: 4   PITKHSLRYDEVRQHLLARSEILLADVREEDPFAQGHPLWAANFPIARLELDAWRRIPQR 63

Query: 67  DTAIVVL--DDGEGLAQKATGRFVALGYSNVSVLDGGVAGWKAAGGELFQDVNVPSKSFG 124
           DT IV+   D    LA  A  +  +LGY+NV +L+GG+  WKA GGELF DVNVPSKSFG
Sbjct: 64  DTLIVLYGHDGIRDLAPIAVEKLKSLGYTNVHILEGGLEAWKADGGELFIDVNVPSKSFG 123

Query: 125 ELVESKRHTPSLSAPEVKALLDAKENVVVLDARRFDEYQNMNIPTSISVPGAELVLRVRE 184
           ELVE+KRHTP   A +VKALLD   N VV DARRFDEYQ M+IP  I+VPG ELVLR R+
Sbjct: 124 ELVEAKRHTPLWDATKVKALLDEGANAVVFDARRFDEYQTMSIPKGINVPGGELVLRARD 183

Query: 185 LAPDPNTRVIVNCAGRTRSIIGTQSLVNAGIPNPVHALRNGTIGWTLAGQELEHGNSRQF 244
           LAPDP T VIVNCAGRTRSIIGTQSL+NAGIPN V  LRNGTIGWTLAGQ LE G SR F
Sbjct: 184 LAPDPETLVIVNCAGRTRSIIGTQSLINAGIPNKVVGLRNGTIGWTLAGQTLEQGASRSF 243