BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0475.p         (114 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2944 [E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase Rso ...   177   4e-45
PA5067 [E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase Pae P...   124   6e-29
NMA0807 [E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase NmA ...   118   3e-27
NMB0603 [E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase Nme ...   118   3e-27
mlr5018 [E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase Mlo ...    75   4e-14

>RSc2944 [E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase Rso Ralstonia
           solanacearum
          Length = 124

 Score =  177 bits (450), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 87/118 (73%), Positives = 99/118 (83%), Gaps = 4/118 (3%)

Query: 1   MSETLRRLAEVIESRKLANGGDPATSYVAKLFSKGDDAILKKIGEEAAETIMAAKDARVS 60
           MS+TLRRL EV+ESRKLANGGDP  SY+A+LF KGDDAILKKIGEEA ET+MAAKDAR +
Sbjct: 1   MSDTLRRLGEVLESRKLANGGDPEKSYIARLFHKGDDAILKKIGEEATETVMAAKDARAA 60

Query: 61  GDA----SKVLYECADLWFHSMVMLAHFDLKPQDVLNELARREGLSGLEEKAARPADA 114
           G       KV+YE ADLWFH+MV+L+HFDL P DV+NELARREGLSGLEEKA R + A
Sbjct: 61  GMTDEARGKVVYEVADLWFHTMVLLSHFDLTPDDVVNELARREGLSGLEEKALRKSQA 118


>PA5067 [E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase Pae Pseudomonas
           aeruginosa
          Length = 111

 Score =  124 bits (311), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 67/114 (58%), Positives = 81/114 (71%), Gaps = 3/114 (2%)

Query: 1   MSETLRRLAEVIESRKLANGGDPATSYVAKLFSKGDDAILKKIGEEAAETIMAAKDARVS 60
           MS+TL RLA V+E RK A    P +SYVA L+ KG + IL+K+GEE+ ETI+AAKDA  S
Sbjct: 1   MSDTLTRLAAVLEERKNAA---PDSSYVASLYHKGLNKILEKVGEESVETIIAAKDAAAS 57

Query: 61  GDASKVLYECADLWFHSMVMLAHFDLKPQDVLNELARREGLSGLEEKAARPADA 114
           GD   ++YE ADLWFHS+VML+     PQ VL+EL RR GLSG  EKAAR   A
Sbjct: 58  GDCQDLIYETADLWFHSLVMLSALGQHPQAVLDELERRFGLSGHAEKAARQPSA 111


>NMA0807 [E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase NmA Neisseria
           meningitidis Z2491
          Length = 107

 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/107 (56%), Positives = 77/107 (71%), Gaps = 7/107 (6%)

Query: 4   TLRRLAEVIESRKLANGGDPATSYVAKLFSKGDDAILKKIGEEAAETIMAAKDARVSGDA 63
            L  + + I  RK AN   P+ SYVA+L  KG+D ILKK+ EEA E +MA+KD     + 
Sbjct: 5   VLSAIQQTITQRKSAN---PSESYVAQLLHKGEDKILKKVIEEAGEVLMASKDK----NP 57

Query: 64  SKVLYECADLWFHSMVMLAHFDLKPQDVLNELARREGLSGLEEKAAR 110
           S ++YE ADLWFH+M++L H DLK +DVL+ELARR+GLSGL EKAAR
Sbjct: 58  SHLVYEVADLWFHTMILLTHHDLKAEDVLDELARRQGLSGLAEKAAR 104


>NMB0603 [E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase Nme Neisseria
           meningitidis MC58
          Length = 107

 Score =  118 bits (295), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/107 (56%), Positives = 77/107 (71%), Gaps = 7/107 (6%)

Query: 4   TLRRLAEVIESRKLANGGDPATSYVAKLFSKGDDAILKKIGEEAAETIMAAKDARVSGDA 63
            L  + + I  RK AN   P+ SYVA+L  KG+D ILKK+ EEA E +MA+KD     + 
Sbjct: 5   VLSAIQQTITQRKSAN---PSESYVAQLLHKGEDKILKKVIEEAGEVLMASKDK----NP 57

Query: 64  SKVLYECADLWFHSMVMLAHFDLKPQDVLNELARREGLSGLEEKAAR 110
           S ++YE ADLWFH+M++L H DLK +DVL+ELARR+GLSGL EKAAR
Sbjct: 58  SHLVYEVADLWFHTMILLTHHDLKAEDVLDELARRQGLSGLVEKAAR 104


>mlr5018 [E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase Mlo
           Mesorhizobium loti
          Length = 107

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 5/97 (5%)

Query: 15  RKLANGGDPATSYVAKLFSKGDDAILKKIGEEAAETIMAAKDARVSGDASKVLYECADLW 74
           R  A+ GDP  S+ AKLF++G D   +K+GEEA ET +AA    V GD   ++ E ADL 
Sbjct: 14  RDRAHSGDP-DSWTAKLFARGIDKAAQKLGEEAVETAIAA----VKGDRQGLVSESADLI 68

Query: 75  FHSMVMLAHFDLKPQDVLNELARREGLSGLEEKAARP 111
           +H +V+L    +   DVL EL  R G SG+ EKA+RP
Sbjct: 69  YHWLVVLGLSGVPLSDVLKELESRTGRSGIAEKASRP 105