BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0461.p         (70 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc04168 Non COG                                                       71   7e-13
PA1298 [S] COG1937 Uncharacterized protein conserved in bacteria...    60   1e-09

>SMc04168 Non COG
          Length = 80

 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 1/70 (1%)

Query: 1  MQAIERALESDADCAKTLHLVAATRGAMNGLTDEIIEAHAREHVADPKLSHAERAQGVEE 60
          M+A+ERALE+   C   L+LVA+ RGA+NGLT E+IE H R HVA  + +  ER +G  E
Sbjct: 12 MEAVERALEARQPCGDILNLVASVRGAVNGLTIELIEDHIRGHVAGHE-TQGEREEGAAE 70

Query: 61 LLEAIRRYSK 70
          L+E +RRY K
Sbjct: 71 LIEIVRRYLK 80


>PA1298 [S] COG1937 Uncharacterized protein conserved in bacteria Pae
          Pseudomonas aeruginosa
          Length = 91

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 47/69 (68%)

Query: 2  QAIERALESDADCAKTLHLVAATRGAMNGLTDEIIEAHAREHVADPKLSHAERAQGVEEL 61
          +A+E+ALE  ++CA  L  +AA RGA+NGL +E++E H REH+   + S  +R + +E +
Sbjct: 23 RALEQALEEGSECAAVLQQIAAIRGAVNGLMNEVLEGHIREHLGAEQASAEQRREDLELV 82

Query: 62 LEAIRRYSK 70
          + A+R Y K
Sbjct: 83 VTALRSYLK 91