BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0451.p (258 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Cj1015c [E] COG0411 ABC-type branched-chain amino acid transport... 186 3e-47 SP0752 [E] COG0411 ABC-type branched-chain amino acid transport ... 186 3e-47 BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transpo... 183 4e-46 RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport... 179 4e-45 DR0283 [E] COG0411 ABC-type branched-chain amino acid transport ... 178 1e-44 >Cj1015c [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Cje Campylobacter jejuni Length = 256 Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 99/253 (39%), Positives = 150/253 (59%), Gaps = 11/253 (4%) Query: 3 LLQVRDLGKSFGGVKALDDVSFDLPEGQLLALLGPNGAGKSTCFNILNGQYKPDAGSVHF 62 +L+++ + KSFG VKA+++ SF + EG++ AL+GPNGAGK+T FNI+ G YKP +GSV F Sbjct: 2 ILELKQISKSFGSVKAINETSFKINEGEIFALIGPNGAGKTTLFNIITGNYKPSSGSVEF 61 Query: 63 DGREISNARSSMKPREVWRLGVGRTFQISATFGSMTVVDNIRMALISRER-----KLFSL 117 G I + +KP ++ LG+ RTFQ F SM V++N+ + + + L Sbjct: 62 LGERIDH----LKPHKIVHLGIARTFQNIRLFSSMNVLENVLIGFNKQMKYNIFEAFLHL 117 Query: 118 WR--PAASMYRDEAMELLAQVGMAAQAQRPCGVLAYGDVKRVELAIALANRPRLLLMDEP 175 R +++++A +L ++G+A A L+YG ++VE+A A+A +PRLLL+DEP Sbjct: 118 GRFGKIEQVFKEKAYAILEELGIAEFAYEKATSLSYGQQRKVEIARAMATQPRLLLLDEP 177 Query: 176 TAGMAPGERNDLMALTKELVVARKLSVLFTEHSMDVVFAFADRMIVLARGRIIAQGDGET 235 AGM E ++L L +L K+SVL EH M V DR++VL G+ I +G Sbjct: 178 AAGMNSSESDELAGLIFKLRKDYKISVLLIEHDMKFVNKLCDRVLVLDYGKTIFEGKLCD 237 Query: 236 IRNHPQVQEVYLG 248 NH +V YLG Sbjct: 238 AVNHKEVIAAYLG 250 >SP0752 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Spn Streptococcus pneumoniae TIGR4 Length = 254 Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 99/255 (38%), Positives = 156/255 (61%), Gaps = 11/255 (4%) Query: 1 MSLLQVRDLGKSFGGVKALDDVSFDLPEGQLLALLGPNGAGKSTCFNILNGQYKPDAGSV 60 M+LL+V+ L K FGG+ A+ DV+ +L EG+L+ L+GPNGAGK+T FN+L G Y+P G+V Sbjct: 1 MALLEVKQLTKHFGGLTAVGDVTLELNEGELVGLIGPNGAGKTTLFNLLTGVYEPSEGTV 60 Query: 61 HFDGREISNARSSMKPREVWRLGVGRTFQISATFGSMTVVDNIRMALISRERK-LFSLWR 119 DG + N +S P ++ LG+GRTFQ F +TV+DN+ +A + ++ +F+ + Sbjct: 61 TLDGH-LLNGKS---PYKIASLGLGRTFQNIRLFKDLTVLDNVLIAFGNHHKQHVFTSFL 116 Query: 120 PAASMYRDE------AMELLAQVGMAAQAQRPCGVLAYGDVKRVELAIALANRPRLLLMD 173 + Y+ E A+ELL + A+ L+YG +R+E+ ALA P++L +D Sbjct: 117 RLPAFYKSEKELKAKALELLKIFDLDGDAETLAKNLSYGQQRRLEIVRALATEPKILFLD 176 Query: 174 EPTAGMAPGERNDLMALTKELVVARKLSVLFTEHSMDVVFAFADRMIVLARGRIIAQGDG 233 EP AGM P E +L L + + K++++ EH M++V +R+ VL GR+IAQG Sbjct: 177 EPAAGMNPQETAELTELIRRIKDEFKITIMLIEHDMNLVMEVTERIYVLEYGRLIAQGTP 236 Query: 234 ETIRNHPQVQEVYLG 248 + I+ + +V E YLG Sbjct: 237 DEIKTNKRVIEAYLG 251 >BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 251 Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 98/248 (39%), Positives = 151/248 (60%), Gaps = 8/248 (3%) Query: 3 LLQVRDLGKSFGGVKALDDVSFDLPEGQLLALLGPNGAGKSTCFNILNGQYKPDAGSVHF 62 +L + L KSFG + V+ + +G+ A++GPNGAGKST F++++G + P +GS+ F Sbjct: 6 ILVLDQLNKSFGPAHIIRGVNLAVRDGERHAVIGPNGAGKSTLFHLISGNFTPSSGSIRF 65 Query: 63 DGREISNARSSMKPREVWRLGVGRTFQISATFGSMTVVDNIRMALISRERKLFSLWRPAA 122 G EI + P V R G+ R+FQI+ F +TV +NIR+A++ R + F+ WRP + Sbjct: 66 QGEEIGG----LTPAAVNRKGLARSFQITNIFPGLTVFENIRLAVMRRYKVQFTFWRPVS 121 Query: 123 SMYR--DEAMELLAQVGMAAQAQRPCGVLAYGDVKRVELAIALANRPRLLLMDEPTAGMA 180 SM + E LL QV + A+A L+Y + + +E+ + LA+ PRL+++DEP AGM+ Sbjct: 122 SMRKVTAEVESLLEQVRLTARAYTLASQLSYSEQRSLEIGMTLASDPRLIILDEPMAGMS 181 Query: 181 PGERNDLMALTKELVVARKLSVLFTEHSMDVVFAFADRMIVLARGRIIAQGDGETIRNHP 240 E + + L +E+ R L ++ EH M VVF ADR+ VL G IIA G + IR + Sbjct: 182 QEETDYTVGLIREITQNRTLMIV--EHDMYVVFTLADRISVLVYGEIIATGTPKEIRENA 239 Query: 241 QVQEVYLG 248 +V+E YLG Sbjct: 240 RVREAYLG 247 >RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 256 Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 98/249 (39%), Positives = 151/249 (60%), Gaps = 8/249 (3%) Query: 3 LLQVRDLGKSFGGVKALDDVSFDLPEGQLLALLGPNGAGKSTCFNILNGQYKPDAGSVHF 62 +L+ R L K+F G A+ DV+ + G + AL+GPNGAGK+TCFN+L P G++ F Sbjct: 6 ILETRGLTKAFKGFTAVSDVNLRVRRGSIHALIGPNGAGKTTCFNLLTKFLVPTRGTILF 65 Query: 63 DGREISNARSSMKPREVWRLGVGRTFQISATFGSMTVVDNIRMALISRERKLFSLWRPAA 122 +G +I+ R P ++ R GV R+FQISA F ++V++N+R+ L + ++ WR Sbjct: 66 NGVDITPER----PAQIARRGVIRSFQISAVFPHLSVLENVRIGLQRQLGTAYAFWRSEK 121 Query: 123 SM--YRDEAMELLAQVGMAAQAQRPCGVLAYGDVKRVELAIALANRPRLLLMDEPTAGMA 180 ++ D AM+LL QVG+ A L YG + +E+A LA P L+L+DEPT GM Sbjct: 122 TLAVLNDRAMQLLDQVGLTPFAGTVTVELPYGRKRALEIATTLAMEPELMLLDEPTQGMG 181 Query: 181 PGERNDLMALTKELVVARKLSVLFTEHSMDVVFAFADRMIVLARGRIIAQGDGETIRNHP 240 + + + L + VA ++L EH+M+VV + AD++ VL RG+I+A+G E + +P Sbjct: 182 HEDVDRVTELIQR--VAEGRTILMVEHNMNVVSSIADKITVLQRGQILAEGPYEDVSKNP 239 Query: 241 QVQEVYLGT 249 QV E Y+GT Sbjct: 240 QVMEAYMGT 248 >DR0283 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Dra Deinococcus radiodurans Length = 290 Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 110/264 (41%), Positives = 154/264 (58%), Gaps = 15/264 (5%) Query: 3 LLQVRDLGKSFGGVKALDDVSFDLPEGQLLALLGPNGAGKSTCFNILNGQYKPDAGSVHF 62 LL+V+ LG FGG+ A+ DV+ L G++ A++GPNGAGKST FN+++G YKP +G + F Sbjct: 14 LLEVQGLGIRFGGLHAVRDVTAQLQPGRITAIIGPNGAGKSTFFNLISGFYKPTSGRIIF 73 Query: 63 DGREISNARSSMKPREVWRLGVGRTFQISATFGSMTVVDNIRMALISRERK--LFSLWRP 120 G +I+ R+ + V G+ RTFQ + + ++V+DN + R R L +L R Sbjct: 74 RGEDITPLRTHL----VVGRGIARTFQTTTIYQELSVLDNAMIGHRVRTRAGLLDALLRT 129 Query: 121 A-----ASMYRDEAMELLAQVGMAAQAQRPCGVLAYGDVKRVELAIALANRPRLLLMDEP 175 S R AM L +VG+A QA P G L KRV +A+ALA+ P LLL+DEP Sbjct: 130 GRERHDESESRAGAMRALERVGLAGQAALPAGALNQEGKKRVGIAMALASDPHLLLLDEP 189 Query: 176 TAGMAPGERNDLMALTKELVVARKLSVLFTEHSMDVVFAFADRMIVLARGRIIAQGDGET 235 AGM P E +LM L ++L V+ LS+ EH M++V AD ++VL G+ IAQG Sbjct: 190 AAGMNPEETENLMGLIRQL-VSGGLSIALVEHKMNLVMGLADDILVLHHGQKIAQGTPAQ 248 Query: 236 IRNHPQVQEVYLGT---GKTFGKE 256 I P V E YLG+ G G+E Sbjct: 249 ITRDPAVVEAYLGSHAHGGQMGQE 272