BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0427.p (385 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr7741 [L] COG0582 Integrase Mlo Mesorhizobium loti 80 6e-15 BMEI1307 [L] COG0582 Integrase Bme Brucella melitensis 76 2e-13 SMc02397 [L] COG0582 Integrase Sme Sinorhizobium meliloti 73 1e-12 SSO0375 [L] COG0582 Integrase Sso Sulfolobus solfataricus 64 5e-10 APE0805 [L] COG0582 Integrase Ape Aeropyrum pernix 63 9e-10 >mlr7741 [L] COG0582 Integrase Mlo Mesorhizobium loti Length = 359 Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 44/253 (17%) Query: 119 IERLVQRRKAEGDAPATMKHEVGLIRSTMKEMIKLGYRVNREI-IFPTFKT----TSRLR 173 ++ L+ + G++ AT+ ++ + +++ K+G +I P F+ R+R Sbjct: 89 LDNLIGTLRQRGNSNATINRKMAALSKLLRKAHKMG-----DIHSLPEFRRQKERAGRIR 143 Query: 174 YLDEAEEAALLRELNPETLRDGLKSLETRNSEMQRNMQDNYDIVVALLDTGCRYSEIANI 233 +L+ EEA L + ++ +D Y + V L+D+GCR E + Sbjct: 144 FLERDEEARLF-------------------AAIRGRSEDAYRLSVFLVDSGCRLGEALGL 184 Query: 234 PWSAVDVEAGTIHVYRSKVSNEDHLHMTARLREIFRRRHA-NKKPDGRYVFENKQGNERG 292 W+ D++ + + +K + MT R++E+ + ++P G + + Q R Sbjct: 185 IWN--DIQEHRVSFWITKSGRSRTIPMTERVKEVIKLPPTEGRRPKGPFT-KLSQAQYRA 241 Query: 293 YSTQAIKKAIDRAGLNAPDVVKEKGGKVTAHVLRHSYASKLVKHGVSLFEVSVLLGHSDP 352 A KA GL A D +V H+LRH+ AS+LV+ G+ + V + LGH Sbjct: 242 IWNDA--KA--EVGLGADD-------QVVPHILRHTCASRLVQGGIDIRRVQMWLGHQTL 290 Query: 353 KMTQRYAHLAPND 365 MT RYAHLA ND Sbjct: 291 SMTMRYAHLATND 303 >BMEI1307 [L] COG0582 Integrase Bme Brucella melitensis Length = 308 Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 35/247 (14%) Query: 119 IERLVQRRKAEGDAPATMKHEVGLIRSTMKEMIKLGYRVNREIIFPTFKTTSRLRYLDEA 178 ++ ++ + G++ AT+ ++ + +++ K+G N + R+R+L++ Sbjct: 86 LDSIIGTLRERGNSNATINRKMAALSKLLRKAHKMGDIFNLPEFIRQKERVGRIRFLEQE 145 Query: 179 EEAALLRELNPETLRDGLKSLETRNSEMQRNMQDNYDIVVALLDTGCRYSEIANIPWSAV 238 EE L + ++ +D+Y + V L++TGCR E + W+ Sbjct: 146 EEKRLF-------------------AAIKSRCEDSYRLSVFLVNTGCRLGEAIGLTWN-- 184 Query: 239 DVEAGTIHVYRSKVSNEDHLHMTARLREIFRRRHANKKPDGRYVFENKQGNERGYSTQAI 298 D++ + + +K + + +T R R+ A+ P R N+ + Q Sbjct: 185 DIQEQRVTFWVTKSNRSRTVPLTRRARK------ASHIPRERLKGPFSMLNQVRFR-QIW 237 Query: 299 KKAIDRAGLNAPDVVKEKGGKVTAHVLRHSYASKLVKHGVSLFEVSVLLGHSDPKMTQRY 358 +A GL A D ++ H+LRH+ AS+LV+ G+ + V + LGH +MT RY Sbjct: 238 NEAKAEVGLGADD-------QIVPHILRHTCASRLVRGGIDIRRVQMWLGHQTLQMTMRY 290 Query: 359 AHLAPND 365 AHLA +D Sbjct: 291 AHLATHD 297 >SMc02397 [L] COG0582 Integrase Sme Sinorhizobium meliloti Length = 310 Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 43/251 (17%) Query: 119 IERLVQRRKAEGDAPATMKHEVGLIRSTMKEMIKLGYRVNREIIFPTFK----TTSRLRY 174 ++ L+ + G++ AT+ ++ + +++ K+G N P FK RLR+ Sbjct: 86 LDGLIGALRKRGNSNATINRKMAALGKLLRKAYKMGDIHN----LPEFKRQKEKAGRLRF 141 Query: 175 LDEAEEAALLRELNPETLRDGLKSLETRNSEMQRNMQDNYDIVVALLDTGCRYSEIANIP 234 L+ EE L RE+ SE+ + + L+DTG R E + Sbjct: 142 LEADEEEVLFREI-------------ASRSELYLYLS------IFLVDTGARLGEAIALK 182 Query: 235 WSAVDVEAGTIHVYRSKVSNEDHLHMTARLREIFRRRHANKKPDGRYVFENKQGNERGYS 294 W+ D+ G + +K + +T R ++ +R A++ P G + ++Q ++ Sbjct: 183 WN--DIHEGRATFWVTKSGRSRTVPLTVRAKDALKRV-ADRSP-GPFSRIDQQKYRAVWN 238 Query: 295 TQAIKKAIDRAGLNAPDVVKEKGGKVTAHVLRHSYASKLVKHGVSLFEVSVLLGHSDPKM 354 + AGL D + H+LRH+ AS+LV+ G+ L V + LGH +M Sbjct: 239 AAKVD-----AGLGNED-------DLVPHILRHTCASRLVRGGIDLRRVQMWLGHQTLEM 286 Query: 355 TQRYAHLAPND 365 T RYAHLA +D Sbjct: 287 TMRYAHLASHD 297 >SSO0375 [L] COG0582 Integrase Sso Sulfolobus solfataricus Length = 291 Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 16/150 (10%) Query: 216 IVVALLDTGCRYSEIANIPWSAVDVEAGTIHVYRSKVSNEDHLHMTARLREIFRRRHANK 275 I+ LLDTG R +E+ ++ +D+E I V +K E + T + + R+ K Sbjct: 140 IIRLLLDTGLRANELLSVLVKDIDLENNMIRVRNTKNGEERIVFFTDETKLLLRKYIKGK 199 Query: 276 KPDGRYVFENKQGNERGYSTQAIKKAIDRAGLNAPDVVKEKGGKVTAHVLRHSYASKLVK 335 K + + +F+ K Y T + + + R G K+ G + H+LRH++A+ +K Sbjct: 200 KAEDK-LFDLK------YDT--LYRKLKRLG-------KKVGIDLRPHILRHTFATLSLK 243 Query: 336 HGVSLFEVSVLLGHSDPKMTQRYAHLAPND 365 G+++ + LLGH D K TQ Y HL +D Sbjct: 244 RGINVITLQKLLGHKDIKTTQIYTHLVLDD 273 >APE0805 [L] COG0582 Integrase Ape Aeropyrum pernix Length = 362 Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 16/156 (10%) Query: 216 IVVALLDTGCRYSEIANIPWSAVDVEAGTIHVYRSKVSNEDHLHMTARLREIFRRRHANK 275 IV L +TG R SE+ ++ S VD+ G + V K E + + R + A+ Sbjct: 145 IVSMLAETGLRVSELLSLRLSDVDLGRGVVRVV-GKYGKERIVFLGPLSRMLLEEYLASN 203 Query: 276 K--PDGRYVFENKQGNERGYSTQAIKKAIDRAGLNAPDVVKEKGGKVTAHVLRHSYASKL 333 PD R + + Q + +K RAGL+ KV H+LRH++A++ Sbjct: 204 PLPPDSRIIELSYQA-----VYKRLKSLAKRAGLDP--------RKVRPHILRHTFATEA 250 Query: 334 VKHGVSLFEVSVLLGHSDPKMTQRYAHLAPNDASRK 369 ++ G+SL + LLGHSD K+TQ Y H+ +D R+ Sbjct: 251 LRRGMSLAALQRLLGHSDIKVTQLYLHMTYDDVERE 286