BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0414.p (208 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1037 [S] COG2860 Predicted membrane protein Pae Pseudomonas ae... 226 2e-59 HI1240 [S] COG2860 Predicted membrane protein Hin Haemophilus in... 196 4e-50 PM0935 [S] COG2860 Predicted membrane protein Pmu Pasteurella mu... 194 1e-49 VC2115 [S] COG2860 Predicted membrane protein Vch Vibrio cholerae 184 1e-46 ZyicG [S] COG2860 Predicted membrane protein EcZ Escherichia col... 180 2e-45 >PA1037 [S] COG2860 Predicted membrane protein Pae Pseudomonas aeruginosa Length = 206 Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 113/203 (55%), Positives = 148/203 (72%), Gaps = 1/203 (0%) Query: 1 MLLYTIYLIAISAEAMSGAIMGIRREMDLFGICLIGTVAALGGGTVRDILIGHYPLGWVA 60 MLL +Y+IAI+AEAM+GA+ RR MDLFG+ LI V ALGGG+VRD+L+GHYPL WV Sbjct: 1 MLLTVLYIIAITAEAMTGALSAGRRSMDLFGVVLIACVTALGGGSVRDMLLGHYPLTWVR 60 Query: 61 HPEYLAFTICAAVVTAVAARKMHHFKSAFLVVDALGLVAFTIIGCDIARGFAHFNPFVVV 120 HPEYLA T AA+VT A M H +S FLV+DA+GLVAFT+IGC ++ H + + Sbjct: 61 HPEYLALTAVAALVTVFIAPLMRHLRSLFLVLDAVGLVAFTLIGCQVSLEMGH-SLLIAA 119 Query: 121 IFGMITGVFGGLLRDVLCNEIPLVLQREVYASVSLVTGGLYVGMLWLNIDASVSTLTALG 180 I G+ITGVFGG+LRD+LCN++PL+ +RE+YASVS + Y+ + L + + + L L Sbjct: 120 ISGVITGVFGGILRDILCNDVPLIFRRELYASVSFASAWCYLICVELELPSEQAMLITLF 179 Query: 181 VGFLFRLLAIRYHWTLPKFNDKD 203 GFLFRLLAIR+HW +PKF +D Sbjct: 180 SGFLFRLLAIRFHWEMPKFVYQD 202 >HI1240 [S] COG2860 Predicted membrane protein Hin Haemophilus influenzae Length = 220 Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 141/212 (66%), Gaps = 5/212 (2%) Query: 1 MLLYTIYLIAISAEAMSGAIMGIRREMDLFGICLIGTVAALGGGTVRDILIGHYPLGWVA 60 MLL +Y+I I+AE M+GA+ R +MD+FG+ +I +V A+GGG+VRD+L+GHYPLGWV Sbjct: 1 MLLSILYIIGITAEGMTGALAAGREKMDIFGVIIIASVTAIGGGSVRDVLLGHYPLGWVK 60 Query: 61 HPEYLAFTICAAVVTAVAARKMHH----FKSAFLVVDALGLVAFTIIGCDIARGFAHFNP 116 HPEY AAV+T A ++H F++ FLV+DA+GLV ++IIG IA H + Sbjct: 61 HPEYFLMVASAAVITVYVAPFINHFMRYFRTIFLVLDAMGLVVYSIIGAQIAMDMGH-SL 119 Query: 117 FVVVIFGMITGVFGGLLRDVLCNEIPLVLQREVYASVSLVTGGLYVGMLWLNIDASVSTL 176 +V I G ITG FGG+LRD+LCN IPLV Q+E+YAS++L Y + L ++ +++ L Sbjct: 120 TIVCIAGCITGAFGGVLRDMLCNRIPLVFQKELYASIALFATLTYYALSTLQVEHTLAVL 179 Query: 177 TALGVGFLFRLLAIRYHWTLPKFNDKDIRGFE 208 L F RLLAI + W LP FN +++ E Sbjct: 180 LTLINSFTLRLLAIHFEWGLPVFNYQELTSEE 211 >PM0935 [S] COG2860 Predicted membrane protein Pmu Pasteurella multocida Length = 226 Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 97/207 (46%), Positives = 143/207 (69%), Gaps = 5/207 (2%) Query: 1 MLLYTIYLIAISAEAMSGAIMGIRREMDLFGICLIGTVAALGGGTVRDILIGHYPLGWVA 60 MLL +Y+I I+AEA++GA+ R +MD+FG+ +I + A+GGG+VRD+L+GHYP+GWV Sbjct: 1 MLLSVLYIIGITAEAITGALAAGREKMDIFGVIIIAAMTAIGGGSVRDVLLGHYPIGWVK 60 Query: 61 HPEYLAFTICAAVVT----AVAARKMHHFKSAFLVVDALGLVAFTIIGCDIARGFAHFNP 116 +P Y AAV+T + R MH+F + FLV+DALGL+ F+IIG +A + Sbjct: 61 NPHYFLIVAGAAVLTVFIVPLIRRFMHYFHTVFLVLDALGLIVFSIIGAQVALDMG-YGF 119 Query: 117 FVVVIFGMITGVFGGLLRDVLCNEIPLVLQREVYASVSLVTGGLYVGMLWLNIDASVSTL 176 + VI +ITG FGG+LRD+LCN IPLV Q+E+YAS++L+ +Y+G+ LNID ++ + Sbjct: 120 TIAVIAAIITGAFGGVLRDLLCNRIPLVFQKELYASIALIATAIYIGLQQLNIDHNLVII 179 Query: 177 TALGVGFLFRLLAIRYHWTLPKFNDKD 203 L GF+ RLLAI + W LP F+ ++ Sbjct: 180 ITLISGFIARLLAIYFEWGLPVFDYQE 206 >VC2115 [S] COG2860 Predicted membrane protein Vch Vibrio cholerae Length = 207 Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 96/200 (48%), Positives = 138/200 (69%), Gaps = 1/200 (0%) Query: 1 MLLYTIYLIAISAEAMSGAIMGIRREMDLFGICLIGTVAALGGGTVRDILIGHYPLGWVA 60 MLL +Y+I I+AEAM+GA+ RR+MD FG+ L+ + A+GGGTVRDIL+GHYPLGWV Sbjct: 1 MLLSVLYIIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVK 60 Query: 61 HPEYLAFTICAAVVTAVAARKMHHFKSAFLVVDALGLVAFTIIGCDIARGFAHFNPFVVV 120 +PEYLA T A V+T + + K F+ +DALGL+ F+IIG +A +P + + Sbjct: 61 NPEYLAITCVAGVLTTWVYKWVIKLKGLFIRLDALGLIVFSIIGTQVAMRMG-LHPGICL 119 Query: 121 IFGMITGVFGGLLRDVLCNEIPLVLQREVYASVSLVTGGLYVGMLWLNIDASVSTLTALG 180 + ++TGVFGGLLRD++C + PLVL E+YAS++L+ GLY+ +L + VST+ L Sbjct: 120 VSAVVTGVFGGLLRDLICRQPPLVLHEELYASIALLASGLYLALLEFGVSDVVSTVVTLV 179 Query: 181 VGFLFRLLAIRYHWTLPKFN 200 VG+ R+ A+R+ W LP F+ Sbjct: 180 VGYTLRMAAVRFKWRLPSFH 199 >ZyicG [S] COG2860 Predicted membrane protein EcZ Escherichia coli O157:H7 EDL933 Length = 223 Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 90/183 (49%), Positives = 122/183 (66%), Gaps = 1/183 (0%) Query: 1 MLLYTIYLIAISAEAMSGAIMGIRREMDLFGICLIGTVAALGGGTVRDILIGHYPLGWVA 60 MLL+ +YL+ I+AEAM+GA+ RR MD FG+ +I T A+GGG+VRDIL+GHYPLGWV Sbjct: 19 MLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVK 78 Query: 61 HPEYLAFTICAAVVTAVAARKMHHFKSAFLVVDALGLVAFTIIGCDIARGFAHFNPFVVV 120 HPEY+ AAV+T + A M + + FLV+DALGLV F+IIG +A H P + V Sbjct: 79 HPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSIIGAQVALDMGH-GPIIAV 137 Query: 121 IFGMITGVFGGLLRDVLCNEIPLVLQREVYASVSLVTGGLYVGMLWLNIDASVSTLTALG 180 + + TGVFGG+LRD+ C IPLV Q+E+YA VS + LY+ + + V ++ L Sbjct: 138 VAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLYIALQHYVSNHDVVIISTLV 197 Query: 181 VGF 183 GF Sbjct: 198 FGF 200