BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0384.p         (225 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

alr7524 [S] COG2128 Uncharacterized conserved protein Nos Nostoc...    82   1e-15
PA2331 [S] COG2128 Uncharacterized conserved protein Pae Pseudom...    71   2e-12
NMB0995 [S] COG2128 Uncharacterized conserved protein Nme Neisse...    69   8e-12
NMA1203 [S] COG2128 Uncharacterized conserved protein NmA Neisse...    62   1e-09

>alr7524 [S] COG2128 Uncharacterized conserved protein Nos Nostoc sp. PCC
           7120
          Length = 193

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 1/150 (0%)

Query: 71  KGAVGKVPNAYADIGSNSPVALEAALNLDAALRKSSLKGKQVEAIKLAVSEAVECDYCLA 130
           K   G +PN    I + SP  L   + L      +S    + + I L  +   +C YC+A
Sbjct: 30  KETFGLIPN-LEGILAESPATLRGGMALWDLFETTSFTPIEQQVIYLTANYEHDCRYCMA 88

Query: 131 AHSLMAKKLGFSAEAVIGLRRAEASGDAQLDALTVFVRELVTTRGTVPAASVAAVKAAGY 190
           AHS +AK +G + E +  LR  +   D +L AL +F + ++  RG V    +    AAGY
Sbjct: 89  AHSGLAKMIGMTPEDIEALRHGQPLADQKLQALRLFTKRMIEARGWVSEPEIEEFLAAGY 148

Query: 191 SDAQIVDTLLAVTAITFTNLFNRVNDTVLD 220
           +  Q+++ +L +      N  N +  T LD
Sbjct: 149 TKQQVLEVILGIAVKIIHNYTNHIAKTPLD 178


>PA2331 [S] COG2128 Uncharacterized conserved protein Pae Pseudomonas
           aeruginosa
          Length = 186

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 3/156 (1%)

Query: 66  LFTAIKGAVGKVPNAYADIGSNSPVALEAALNLDAALRKSSLKGKQVEAIKLAVSEAVEC 125
           L TA+  + G +PN    + +N+P ALE  L +     K+SL   + E ++L  +    C
Sbjct: 20  LQTALNNS-GYIPNLLG-VLANAPAALETYLTVSGLNAKASLGLPEREVVQLVAATTHGC 77

Query: 126 DYCLAAHSLMAKKLGFSAEAVIGLRRAEAS-GDAQLDALTVFVRELVTTRGTVPAASVAA 184
           D+C+A H+ +A+      E VI   RA     DA+ +AL  F R ++ +RG V      A
Sbjct: 78  DFCVAGHTAVARNKARLPEPVIEALRARGELPDARYEALADFTRAVIASRGAVTDEQFEA 137

Query: 185 VKAAGYSDAQIVDTLLAVTAITFTNLFNRVNDTVLD 220
            +AAG+  AQ ++ +L V+  T  N  N    T L+
Sbjct: 138 FRAAGFDQAQALEVILGVSLATLCNFANVFARTPLN 173


>NMB0995 [S] COG2128 Uncharacterized conserved protein Nme Neisseria
           meningitidis MC58
          Length = 227

 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%)

Query: 30  HIPIQFVCSYFFLLKGSIMPRLHTQDISTVTGPAAQLFTAIKGAVGKVPNAYADIGSNSP 89
           H P+  +C      +G  M RL    + T    A     A+    G +PN    + SN+P
Sbjct: 33  HAPVPNICE-----QGKKMARLTVHTLETAPEAAKARVEAVLQNNGFIPNLIG-VLSNAP 86

Query: 90  VAL---EAALNLDAALRKSSLKGKQVEAIKLAVSEAVECDYCLAAHSLMAKKLGFSAEAV 146
            AL   +    L+AA   +SL   +VE I++  +   +C +C+A H+ +A      +E  
Sbjct: 87  EALAFYQEVGKLNAA---NSLTAGEVEVIQIIAARTNQCGFCVAGHTKLATLKKLLSEQS 143

Query: 147 IGLRRAEASG---DAQLDALTVFVRELVTTRGTVPAASVAAVKAAGYSDAQIVDTLLAVT 203
           +   RA A+G   DA+L AL  F + ++  +G V    + A   AGY+  Q V+ ++ V 
Sbjct: 144 VKAARALAAGEFDDAKLGALAAFTQAVMAKKGAVSDEELKAFFDAGYNQQQAVEVVMGVA 203

Query: 204 AITFTNLFNRVNDTVLD 220
             T  N  N +  T ++
Sbjct: 204 LATLCNYVNNLGQTEIN 220


>NMA1203 [S] COG2128 Uncharacterized conserved protein NmA Neisseria
           meningitidis Z2491
          Length = 182

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 10/179 (5%)

Query: 48  MPRLHTQDISTVTGPAAQLFTAIKGAVGKVPNAYADIGSNSPVAL---EAALNLDAALRK 104
           M RL    + T    A     A+    G +PN    + SN+P AL   +    L+AA   
Sbjct: 1   MARLTVHTLETAPEAAKARVEAVLQNNGFIPNLIGVL-SNAPEALAFYQEVGKLNAA--- 56

Query: 105 SSLKGKQVEAIKLAVSEAVECDYCLAAHSLMAKKLGFSAEAVIGLRRAEASG---DAQLD 161
           +SL   +VE I++  +   +C +C+A H+ +A      +E  +   RA A+G   DA+L 
Sbjct: 57  NSLTAGEVEVIQIIAARTNQCGFCVAGHTKLATLKKLLSEQSVKAARALAAGEFDDAKLG 116

Query: 162 ALTVFVRELVTTRGTVPAASVAAVKAAGYSDAQIVDTLLAVTAITFTNLFNRVNDTVLD 220
           AL  F + ++  +G V    + A   AGY+  Q V+ ++ V   T  N  N +  T ++
Sbjct: 117 ALAAFTQAVMAKKGAVSDEELKAFFDAGYNQQQAVEVVMGVALATLCNYVNNLGQTEIN 175