BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0353.p         (409 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMb21538 [R] COG1524 Uncharacterized proteins of the AP superfam...   504   e-142

>SMb21538 [R] COG1524 Uncharacterized proteins of the AP superfamily Sme
           Sinorhizobium meliloti
          Length = 424

 Score =  504 bits (1299), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 238/405 (58%), Positives = 297/405 (73%), Gaps = 5/405 (1%)

Query: 6   NLQVNGRSYPWMKKPVVVVCVDGCEQEYINQAIQAGVTPFLKKMAQQGTVLTGDCVVPSF 65
           ++ VNGR YPW + P + VC+DGCE  Y++ AI AG+ P LK++ ++G V     V+PSF
Sbjct: 8   SVTVNGRRYPWPRVPAIAVCLDGCEPAYLDAAIDAGLMPALKRIKERGAVRLAHSVIPSF 67

Query: 66  TNPNNLSIVTGVPPSVHGICGNYFLDREANQEVMMNDAKYLRAGTIFAAFSDAGAKVAVI 125
           TNPNNLSI TG PP+VHGICGNY  +    +EVMMND K+LRA TIF AF DAGA+VAV+
Sbjct: 68  TNPNNLSIATGSPPAVHGICGNYLYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVV 127

Query: 126 TAKDKLRGLLGNKMR-----GICFSAEKADQATLESNGVENLLELTGMPLPSVYSAELSE 180
           TAKDKLR LLG  +R      +CFS+EK+D+AT   +G++N     G P+P VYSA LSE
Sbjct: 128 TAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDNASAWLGRPVPEVYSAALSE 187

Query: 181 FVFAAGVKLLETQRPDIMYLSTTDYIQHKFAPGTPGANAFYAMMDHYLTQLDALGAVIGL 240
           FVFAAGVKLL   RPDIMYL+TTDY+QHK+APG P AN+FY M D YL +LD LGA I +
Sbjct: 188 FVFAAGVKLLREFRPDIMYLTTTDYVQHKYAPGVPEANSFYEMFDRYLAELDGLGAAIVV 247

Query: 241 TADHGMNAKTDSAGTPNVIYLQDALDTKVGVGKTRVILPITDPYVVHHGALGSYATVYLS 300
           TADHGM  K  + G+P+VIY+QD LD  +G    RVILPITDPYVVHHGALGS+AT YL 
Sbjct: 248 TADHGMKPKHKADGSPDVIYVQDLLDEWLGKDAARVILPITDPYVVHHGALGSFATAYLP 307

Query: 301 EGVALPDVARKIAAIAGVELVLTRAEAAERFELPEDRIGDLVVVSERLTVIGTATTRHDL 360
           +G    ++  ++ AI GV++VL R EA  RFELPEDRIGD+V+VS     +GT+  RHDL
Sbjct: 308 DGCDRSEIMARLKAIQGVDVVLGREEACRRFELPEDRIGDIVLVSSENKTLGTSEHRHDL 367

Query: 361 SELHLPLRSHGGISEQRVPLMFNRKLAEIPSDHRLRNFDVFYLAM 405
           + L  PLRSHGG++EQ VP + NR L E+P+  RLRNFD F+ A+
Sbjct: 368 AALDEPLRSHGGLTEQEVPFIVNRVLPELPNAPRLRNFDAFFYAV 412