BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0338.p         (247 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2194 [S] COG0799 Uncharacterized homolog of plant Iojap prote...   192   8e-49
NMB2023 [S] COG0799 Uncharacterized homolog of plant Iojap prote...   107   3e-23
NMA0417 [S] COG0799 Uncharacterized homolog of plant Iojap prote...   107   3e-23
PA4005 [S] COG0799 Uncharacterized homolog of plant Iojap protei...   101   2e-21
aq_1272 [S] COG0799 Uncharacterized homolog of plant Iojap prote...    87   4e-17

>RSc2194 [S] COG0799 Uncharacterized homolog of plant Iojap protein Rso
           Ralstonia solanacearum
          Length = 203

 Score =  192 bits (487), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 85/111 (76%), Positives = 96/111 (86%)

Query: 1   MDIKKLQTAVVDALEDVKAQDIKIYDTTHLTSLFDRVAIASGTSNRQTKALAASVRDKVK 60
           MDI+KLQ  +VDALEDVKAQDIK+++TTHLT LFDR  IASGTSNRQTKALAASVRD VK
Sbjct: 1   MDIRKLQRVIVDALEDVKAQDIKVFNTTHLTELFDRTVIASGTSNRQTKALAASVRDAVK 60

Query: 61  AKGGHVVSVEGEDTGEWVLVDLGDMIVHIMQPAIRAYYRLEEIWGDKEVKM 111
             GGHV++VEGED GEWVLVD GD +VHIMQP +R YY LEEIWGDK V++
Sbjct: 61  EAGGHVIAVEGEDVGEWVLVDCGDAVVHIMQPQLRQYYNLEEIWGDKPVRI 111


>NMB2023 [S] COG0799 Uncharacterized homolog of plant Iojap protein Nme
           Neisseria meningitidis MC58
          Length = 128

 Score =  107 bits (267), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 73/104 (70%), Gaps = 1/104 (0%)

Query: 2   DIKKLQTAVVDALEDVKAQDIKIYDTTHLTSLFDRVAIASGTSNRQTKALAASVRDKVKA 61
           D++K+    V+AL D+KA+DI + +T   TSLF R+ IASG S RQ KALA +V   +K 
Sbjct: 8   DLQKMVGVAVNALGDIKAKDISVLETQDKTSLFARMIIASGDSTRQVKALANNVAVDLKE 67

Query: 62  KGGHVVSVEGEDTGEWVLVDLGDMIVHIMQPAIRAYYRLEEIWG 105
            G  ++S EG D+GEW LVD GD++VH+M PA+R +Y ++ +WG
Sbjct: 68  AGFEILSTEG-DSGEWTLVDAGDLVVHVMLPAVRDFYDIDTLWG 110


>NMA0417 [S] COG0799 Uncharacterized homolog of plant Iojap protein NmA
           Neisseria meningitidis Z2491
          Length = 128

 Score =  107 bits (267), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 73/104 (70%), Gaps = 1/104 (0%)

Query: 2   DIKKLQTAVVDALEDVKAQDIKIYDTTHLTSLFDRVAIASGTSNRQTKALAASVRDKVKA 61
           D++K+    V+AL D+KA+DI + +T   TSLF R+ IASG S RQ KALA +V   +K 
Sbjct: 8   DLQKMVGVAVNALGDIKAKDISVLETQDKTSLFARMIIASGDSTRQVKALANNVAVDLKE 67

Query: 62  KGGHVVSVEGEDTGEWVLVDLGDMIVHIMQPAIRAYYRLEEIWG 105
            G  ++S EG D+GEW LVD GD++VH+M PA+R +Y ++ +WG
Sbjct: 68  AGFEILSTEG-DSGEWTLVDAGDLVVHVMLPAVRDFYDIDTLWG 110


>PA4005 [S] COG0799 Uncharacterized homolog of plant Iojap protein Pae
           Pseudomonas aeruginosa
          Length = 118

 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/104 (47%), Positives = 68/104 (65%)

Query: 1   MDIKKLQTAVVDALEDVKAQDIKIYDTTHLTSLFDRVAIASGTSNRQTKALAASVRDKVK 60
           M  ++L    +DALED+KAQDI   D    TS+ D + IA G+S+RQ K+LA +V  K K
Sbjct: 1   MQTEQLVQVAIDALEDLKAQDIVTLDVRDKTSVTDYMVIACGSSSRQVKSLADNVLTKAK 60

Query: 61  AKGGHVVSVEGEDTGEWVLVDLGDMIVHIMQPAIRAYYRLEEIW 104
             G   +  EG ++GEW L+DLGD++VH+M PA R +Y LE +W
Sbjct: 61  ENGVKPLGSEGLESGEWALLDLGDVVVHVMLPATRQFYDLERLW 104


>aq_1272 [S] COG0799 Uncharacterized homolog of plant Iojap protein Aae
           Aquifex aeolicus
          Length = 109

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 59/95 (62%)

Query: 12  DALEDVKAQDIKIYDTTHLTSLFDRVAIASGTSNRQTKALAASVRDKVKAKGGHVVSVEG 71
           + LE+ KA+DI I D + LT+L D   IA+  S    +ALA  + ++++ +G  +  +EG
Sbjct: 9   ELLENKKAEDIVILDVSKLTNLADYFVIATANSTTHARALADYLEEELEKRGIEIDHIEG 68

Query: 72  EDTGEWVLVDLGDMIVHIMQPAIRAYYRLEEIWGD 106
           +D G W+L+DL D IVHI  P  R YY LE IW D
Sbjct: 69  KDYGHWILIDLIDTIVHIFTPETREYYGLEWIWAD 103