BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0324.p         (302 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2124 Non COG                                                        91   3e-18

>RSc2124 Non COG
          Length = 213

 Score = 91.3 bits (225), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 91/183 (49%), Gaps = 16/183 (8%)

Query: 19  CASTISSDVTAFH--AWPNDLPDKSYVFTPTKDQESSLEYRNYEQLVRAELQRLGFTDAA 76
           CAST++S VTAF    W  D P +++ F  T  Q++ LE + YE     +L   GF  A 
Sbjct: 26  CASTVTSQVTAFRQPGW-TDNPPRTFAFERTAAQQNDLERQTYEAWTADQLAARGFAAAP 84

Query: 77  GAKAPFKATLKVAFSYGMQAGTVVVTQPVY-DPFWYGPTYPGWRGRPFGPWGPGPFYDPF 135
              A +     V   Y      + V QPVY DP+W    +  W G P+G WGP       
Sbjct: 85  HGSARYL----VRLDYSAATRLMQVRQPVYPDPYWGPGPWGPWHG-PWGAWGP------- 132

Query: 136 WGPPMQTTTFPVFQRRLYLSITRADSDRKLYEVTVDSEGREATLPMAMPYMVASAFSEFP 195
           WGP    TT  V     +  I  A + +++Y+VT  ++G + +L   MPY+V SAF+ FP
Sbjct: 133 WGPQYVDTTVQVPFYAYHAEIDEAATGKRVYQVTAQTQGGDGSLAGVMPYLVRSAFANFP 192

Query: 196 GPS 198
            P+
Sbjct: 193 APN 195