BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0299.p         (134 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGl595 [IQR] COG1028 Dehydrogenases with different specificities...    97   1e-20

>AGl595 [IQR] COG1028 Dehydrogenases with different specificities (related
           to short-chain alcohol dehydrogenases) Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 249

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/127 (49%), Positives = 69/127 (54%), Gaps = 8/127 (6%)

Query: 1   VNVASTVTLKSLPLLPVYTASKAAIVAFTASLALELQEFNIRVGVVLPGMAPETAFASNA 60
           +NV STVTL S PL   YTASK AI  FT SLA EL  FNI V +V PG AP T F +NA
Sbjct: 125 INVTSTVTLASFPLAAAYTASKQAIEGFTGSLAHELAHFNIGVKLVEPGYAPTTGFTNNA 184

Query: 61  HARVAQAFPEDYAATMNAVLSGFQNYTGAVTHSADVAEAVWQVVQDGPTGFRVPAGPXTV 120
              + Q   +DYAA    VL  F       T   DVAEAVW  V D        +G    
Sbjct: 185 ILPLEQLLHDDYAAFARPVLEAFAT-PALTTRETDVAEAVWSAVHD-------TSGQLHF 236

Query: 121 PAGADAV 127
           PAGADAV
Sbjct: 237 PAGADAV 243