BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0251.p         (185 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0410 [S] COG1934 Uncharacterized protein conserved in bacteri...   141   9e-34
NMB0355 [S] COG1934 Uncharacterized protein conserved in bacteri...    82   9e-16
NMA2132 [S] COG1934 Uncharacterized protein conserved in bacteri...    82   9e-16
PM0172 [S] COG1934 Uncharacterized protein conserved in bacteria...    77   2e-14
HI1149m [S] COG1934 Uncharacterized protein conserved in bacteri...    73   3e-13

>RSc0410 [S] COG1934 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 191

 Score =  141 bits (355), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 73/157 (46%), Positives = 100/157 (63%), Gaps = 4/157 (2%)

Query: 24  ERADTEKPTRIEAEQMVYDDVKQVKTFTGNVVLTRGTLLIKAGKVVLTTDPAGYEFAILY 83
           ERAD +KP  +EA+   YDD+KQV   +GNVVLT+GT+++++    L TDP GY +A+  
Sbjct: 29  ERADRDKPLVLEADNASYDDLKQVYHLSGNVVLTKGTMVLRSDTADLRTDPEGYNYAVAI 88

Query: 84  AAPGQLASFRQKRDGGPNLWIEGQAERIEYSEKTEISKLFTRAHMQRMDGPRVTDEVNGE 143
           A PG LA  RQKRD   + +I+G  ERIEY  K EISKL  RA M+R+ G    DE+ G 
Sbjct: 89  AKPGNLAFIRQKRD-NVDEYIQGWGERIEYDGKQEISKLINRARMERLQGATQLDEIRGA 147

Query: 144 FISYDSRAEFYSVNN--TNTGESKPGGGRITAIIQPR 178
            I+YD + EFY+ +    N   + P  GR+ A++ PR
Sbjct: 148 VITYDGQKEFYTASGGAENATAANP-SGRVRAVLAPR 183


>NMB0355 [S] COG1934 Uncharacterized protein conserved in bacteria Nme
           Neisseria meningitidis MC58
          Length = 176

 Score = 81.6 bits (200), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 88/174 (50%), Gaps = 11/174 (6%)

Query: 6   LLPLFTVLLMSVAGIARAERADTEKPTRIEAEQMVYDDVKQVKTFTGNVVLTRGTLLIKA 65
           +  LF ++    A  A A ++D+ +P +IEA+Q   D   Q  TF+GNVV+ +GTL I A
Sbjct: 5   ICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQANQSTTFSGNVVIRQGTLNISA 64

Query: 66  GKVVLTTDPAGYEFAILYAAPGQLASFRQKRDGGPNLWIEGQAERIEYSEKTEISKLFTR 125
            +V +T    G E      +P     F Q  DGG    + GQA  + YS       L   
Sbjct: 65  ARVNVTRGGKGGESVRAEGSP---VRFSQTLDGGKG-TVRGQANNVAYSSAGSTVVLTGN 120

Query: 126 AHMQRMDGPRVTDEVNGEFISYDSRAEFYSVN-NTNTG-ESKPGGGRITAIIQP 177
           A +QR       D   G  I+Y+++ E Y+++ +T +G +S    GR++ +IQP
Sbjct: 121 AKVQRGG-----DVAEGAVITYNTKTEVYTISGSTKSGAKSASKSGRVSVVIQP 169


>NMA2132 [S] COG1934 Uncharacterized protein conserved in bacteria NmA
           Neisseria meningitidis Z2491
          Length = 176

 Score = 81.6 bits (200), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 88/174 (50%), Gaps = 11/174 (6%)

Query: 6   LLPLFTVLLMSVAGIARAERADTEKPTRIEAEQMVYDDVKQVKTFTGNVVLTRGTLLIKA 65
           +  LF ++    A  A A ++D+ +P +IEA+Q   D   Q  TF+GNVV+ +GTL I A
Sbjct: 5   ICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQANQSTTFSGNVVIRQGTLNISA 64

Query: 66  GKVVLTTDPAGYEFAILYAAPGQLASFRQKRDGGPNLWIEGQAERIEYSEKTEISKLFTR 125
            +V +T    G E      +P     F Q  DGG    + GQA  + YS       L   
Sbjct: 65  ARVNVTRGGKGGESVRAEGSP---VRFSQTLDGGKG-TVRGQANNVAYSSAGSTVVLTGN 120

Query: 126 AHMQRMDGPRVTDEVNGEFISYDSRAEFYSVN-NTNTG-ESKPGGGRITAIIQP 177
           A +QR       D   G  I+Y+++ E Y+++ +T +G +S    GR++ +IQP
Sbjct: 121 AKVQRGG-----DVAEGAVITYNTKTEVYTISGSTKSGAKSASKSGRVSVVIQP 169


>PM0172 [S] COG1934 Uncharacterized protein conserved in bacteria Pmu
           Pasteurella multocida
          Length = 170

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 15/177 (8%)

Query: 1   MKTTSLLPLFTVLLMSVAGIARAERADTEKPTRIEAEQMVYDDVKQVKTFTGNVVLTRGT 60
           MK+ + + +FT L  + A  A A ++DT++P  + ++    D    V TFT NVV+T+G+
Sbjct: 1   MKSINNIVIFTTLF-ATALPAFALKSDTKQPINVVSDNQSLDMDNSVVTFTDNVVITQGS 59

Query: 61  LLIKAGKVVLTTDPAGYEFAILYAAPGQLASFRQKRDGGPNLWIEGQAERIEYSEKTEIS 120
           +LIKA KV++T  P          A G+  +F QK D G    +EG A ++ Y    E  
Sbjct: 60  ILIKASKVIITRPPENSGKKDTIEAFGKPVTFYQKLDDGK--PVEGHANQVHYDLTQEFL 117

Query: 121 KLFTRAHMQRMDGPRVTDEVNGEFISYDSRAEFYSVNNTNTGESKPGGGRITAIIQP 177
            L   A ++++D      ++N + I+YD   +  + N+T        G R+  ++ P
Sbjct: 118 TLTGNAELKQLDS-----KINSDVITYDVNKQQLNANSTQ-------GSRVRTVLIP 162


>HI1149m [S] COG1934 Uncharacterized protein conserved in bacteria Hin
           Haemophilus influenzae
          Length = 172

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 19/188 (10%)

Query: 1   MKTTSLLPLFTVLLMSVAGIARAERADTEKPTRIEAEQMVYDDVKQVKTFTGNVVLTRGT 60
           MK  S   LF   ++  +  A A + D  +P  I ++    D  K V TFT NVV+T+G+
Sbjct: 1   MKLVSNKILFLATMVLASSSAFALKDDVNQPINIVSDNQSLDMEKSVVTFTDNVVITQGS 60

Query: 61  LLIKAGKVVLT--TDPAGYEFAILYAAPGQLASFRQKRDGGPNLWIEGQAERIEYSEKTE 118
           ++IKA KVV+T   + +G +  +   A G   +F Q+ D G    ++G+A ++ Y    E
Sbjct: 61  IVIKANKVVITRPAEKSGKKETV--EAFGTPVTFHQQLDNGK--PVDGKANKVHYDLGNE 116

Query: 119 ISKLFTRAHMQRMDGPRVTDEVNGEFISYDSRAEFYSVNNTNTGESKPGGGRITAIIQP- 177
              L   A ++++D      ++NG  I+YD + +    N         G  R+T ++ P 
Sbjct: 117 FLTLTNNAELKQLDS-----KINGSVITYDVKKQQLKANGN-------GKSRVTTVLIPS 164

Query: 178 RVDSSKGQ 185
           ++  +KG+
Sbjct: 165 QLQQAKGK 172