BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0244.p (278 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr6798 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 183 3e-46 PA3512 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 161 1e-39 AGl128GM [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate tran... 160 4e-39 mll8571 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 149 6e-36 CAC1399 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 147 3e-35 >mlr6798 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Mlo Mesorhizobium loti Length = 275 Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 98/240 (40%), Positives = 153/240 (63%), Gaps = 4/240 (1%) Query: 35 IPAV--FVAVVVVWEAIIRCFEIPIYIMPAPSNIALALVNT--SYLDNALYTLGEAMLGF 90 +PAV + +VVWEA++R F I +I+PAPS IA +LV + + L T GE + GF Sbjct: 30 LPAVILLLVTIVVWEAVVRIFAISAFIIPAPSEIAQSLVAQWGTLMQATLVTAGEILFGF 89 Query: 91 LLAALLGIVLGGLIAQFPLAEKTLYPYLIAIQTTPKVAVAPLFIMWFGFGMTSKVIIAAT 150 L++ ++GI + +I +F + LYP ++ Q PKVA+AP+FI+WFG+G+ K+ + Sbjct: 90 LVSVVVGIAIALVIVRFDWLGRALYPLVVLFQNVPKVALAPIFILWFGYGLAPKIGLILV 149 Query: 151 IAFFPILVNVISGLRTTDPARLELMRSLRATRWQIFTMVRLPGALPMIFAGLNIAIIFSI 210 IAFFP+ +++++G+++ D + L LM S+ A+R QI +R+P +LP + AG IA S+ Sbjct: 150 IAFFPVTLSMLAGMQSVDRSLLSLMNSVGASRTQILFRIRVPHSLPNLMAGTKIAATLSV 209 Query: 211 LGAIVGEFLGSRKGLGNAIMQMNVNLDTAGVFATLFVLSAIGVCLHVLMSFLQRKALFWA 270 +GAIVGEF G+ GLG I + LDTA VFA L ++S +G+ + L+R + WA Sbjct: 210 IGAIVGEFAGASDGLGYVIQFASTQLDTALVFAALLLVSVLGIAFYYAAEILERIVVPWA 269 >PA3512 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 258 Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 86/237 (36%), Positives = 140/237 (59%), Gaps = 4/237 (1%) Query: 46 WEAIIRCFEIPIYIMPAPSNIALALV----NTSYLDNALYTLGEAMLGFLLAALLGIVLG 101 W+ +P +++P S +A V L++ T E ++GF L ALLG+ +G Sbjct: 22 WQWGPGLLGMPEFVLPGLSRVAAEGVAMWHGAGLLEHTAITSLEIVVGFALGALLGVSIG 81 Query: 102 GLIAQFPLAEKTLYPYLIAIQTTPKVAVAPLFIMWFGFGMTSKVIIAATIAFFPILVNVI 161 + P E L PY++A+Q PKVA APLF+MW G+ + K++IA I FFP+++NV+ Sbjct: 82 VALGLSPTTEAMLSPYILALQIAPKVAFAPLFVMWLGYTVYPKILIAVLIVFFPVMINVL 141 Query: 162 SGLRTTDPARLELMRSLRATRWQIFTMVRLPGALPMIFAGLNIAIIFSILGAIVGEFLGS 221 S +RT DP + L+R++ A+RWQIF +V P A+ +F+GL IA +++G VGE +G Sbjct: 142 SAIRTVDPDMINLVRAMSASRWQIFRLVEFPSAMAALFSGLRIASTLAVIGVTVGELVGG 201 Query: 222 RKGLGNAIMQMNVNLDTAGVFATLFVLSAIGVCLHVLMSFLQRKALFWADSSRIPTV 278 KGLG ++ +TAGVF + +L+ IGV + + + +++ L + + + TV Sbjct: 202 NKGLGFLLVDAEGQGNTAGVFVAIVMLTLIGVLAYGAVVWAEKRVLHYLPKANLGTV 258 >AGl128GM [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 267 Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 94/233 (40%), Positives = 143/233 (61%), Gaps = 2/233 (0%) Query: 44 VVWEAIIRCFEIPIYIMPAPSNIALALVNTS--YLDNALYTLGEAMLGFLLAALLGIVLG 101 +VWE +R ++P YI+PAPS + L N +LYTL +LGFL+A ++G +L Sbjct: 24 IVWEIAVRALKVPEYILPAPSRVFADLYNNVPVVFTASLYTLQPMVLGFLVAVVMGTLLA 83 Query: 102 GLIAQFPLAEKTLYPYLIAIQTTPKVAVAPLFIMWFGFGMTSKVIIAATIAFFPILVNVI 161 L+ E YP L+ +Q PK+A+APLFI+W GFG+ SK+++ ++FFPI+VN I Sbjct: 84 LLVVYSRAFEAIFYPLLVILQIIPKIAIAPLFIIWVGFGLPSKILLVFLLSFFPIVVNSI 143 Query: 162 SGLRTTDPARLELMRSLRATRWQIFTMVRLPGALPMIFAGLNIAIIFSILGAIVGEFLGS 221 ++ +P +L +S RA R +IF V LPGALP +FAG +A S A+V EF+ S Sbjct: 144 VAFKSIEPDVYDLAKSYRAGRLKIFWKVELPGALPSLFAGFKVAAALSATAAVVAEFVAS 203 Query: 222 RKGLGNAIMQMNVNLDTAGVFATLFVLSAIGVCLHVLMSFLQRKALFWADSSR 274 GLG ++ N N++T+ FA + VLS +G+ L+ ++ ++R A+ W S R Sbjct: 204 DNGLGYLLLNYNGNMNTSMTFAVIIVLSLLGLLLYGIVELIERFAIPWHVSQR 256 >mll8571 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Mlo Mesorhizobium loti Length = 251 Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 89/248 (35%), Positives = 145/248 (58%), Gaps = 4/248 (1%) Query: 24 RTLKARPELLLIPAVF--VAVVVVWEAIIRCFEIPIYIMPAPSNIALALVNTSYL--DNA 79 R + P+L + VF ++++ W+ ++ +P YI+P P+ I+ L DN Sbjct: 2 RPVPLSPQLSIALPVFGAASLLLAWQYLLPLLGVPAYIVPTPTAISGVFQRNFALLMDNL 61 Query: 80 LYTLGEAMLGFLLAALLGIVLGGLIAQFPLAEKTLYPYLIAIQTTPKVAVAPLFIMWFGF 139 TL EA+ GF++ L ++L L + + T +P ++ T P +A++P+ I+ FG Sbjct: 62 RPTLIEALAGFVIGNLAAVLLAVLFVHNRILQATYFPIVLFFNTIPILALSPIIILIFGL 121 Query: 140 GMTSKVIIAATIAFFPILVNVISGLRTTDPARLELMRSLRATRWQIFTMVRLPGALPMIF 199 GMT K++IAA I FFP LVN+I GL + EL R L ATR +IF +RLP ALPM+F Sbjct: 122 GMTPKIVIAAVICFFPTLVNMIRGLDSASDNEHELFRVLSATRAEIFWSLRLPRALPMLF 181 Query: 200 AGLNIAIIFSILGAIVGEFLGSRKGLGNAIMQMNVNLDTAGVFATLFVLSAIGVCLHVLM 259 + L IA +++GAIVGE++GS KGLG I+Q + N + ++A + + S + + L + Sbjct: 182 SSLRIASATAVIGAIVGEWIGSDKGLGALIIQASFNYQSDRLYAAIVLSSCLSIVLFCAV 241 Query: 260 SFLQRKAL 267 ++R+ + Sbjct: 242 VLVERRVI 249 >CAC1399 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Cac Clostridium acetobutylicum Length = 250 Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 79/236 (33%), Positives = 144/236 (61%), Gaps = 2/236 (0%) Query: 37 AVFVAVVVVWEAIIRCFEIPIYIMPAPSNIALALVNT--SYLDNALYTLGEAMLGFLLAA 94 A +AV+++W+ I+ +IP Y++P+P +I L L++ + + N T+ E+++GF +A Sbjct: 15 AALIAVIILWQLIVDFRKIPEYVIPSPKDICLTLISEFGTIMQNTKVTIYESLVGFFIAI 74 Query: 95 LLGIVLGGLIAQFPLAEKTLYPYLIAIQTTPKVAVAPLFIMWFGFGMTSKVIIAATIAFF 154 + +L ++ F + K LYP ++ QT P +A+APLFI+WFGFG K+I+ FF Sbjct: 75 IFAFILAIIMDSFQIVRKALYPIIVISQTIPTIAIAPLFIIWFGFGPLPKIIVVVITCFF 134 Query: 155 PILVNVISGLRTTDPARLELMRSLRATRWQIFTMVRLPGALPMIFAGLNIAIIFSILGAI 214 PI++++I G D + L RS++A+R QIF ++LP A+ +F+G+ IA + I+ A+ Sbjct: 135 PIVISLIDGFEKIDKDYINLFRSMKASRIQIFYHLKLPSAMVNLFSGIKIACTYMIMAAV 194 Query: 215 VGEFLGSRKGLGNAIMQMNVNLDTAGVFATLFVLSAIGVCLHVLMSFLQRKALFWA 270 +GE+LG G+G +++ VFA++ V+ I + L ++ F+ ++ + W Sbjct: 195 IGEWLGGDGGIGVYMVRAKNAYALDKVFASIVVIVIISIVLIYIVDFIGKRIIHWK 250