BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0234.p (289 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH3799 [I] COG1960 Acyl-CoA dehydrogenases Bha Bacillus halodurans 208 1e-53 BH3798 [I] COG1960 Acyl-CoA dehydrogenases Bha Bacillus halodurans 199 6e-51 RSp0652 [I] COG1960 Acyl-CoA dehydrogenases Rso Ralstonia solana... 199 7e-51 BS_mmgC [I] COG1960 Acyl-CoA dehydrogenases Bsu Bacillus subtilis 199 8e-51 PA2552 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aerug... 195 1e-49 >BH3799 [I] COG1960 Acyl-CoA dehydrogenases Bha Bacillus halodurans Length = 379 Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 114/280 (40%), Positives = 163/280 (58%), Gaps = 1/280 (0%) Query: 1 LLCAGTDKQKDTYIRAMVAGRKSISFALSEREAGSDPSNMQTLATPENGGWRLRGEKRWI 60 +L GT++QK +I + G +F L+E AGSD +N++T A + +RL G K +I Sbjct: 98 ILFFGTEEQKSRFIPKLAKGEYLGAFGLTEPSAGSDAANLKTTALKQGDHYRLNGSKVFI 157 Query: 61 GGGGECAYYVVFAQTEPGAGRRGIAAFMVAADAEGVRDDAREDKMGMRGTVNSTVVL-DT 119 GG YVVFA T P AGR+GI+AF+V + G +E KMG+ G+ + ++ D Sbjct: 158 TNGGAADTYVVFASTNPSAGRKGISAFIVEKETPGFTVGKKEKKMGLHGSNTTELIFEDA 217 Query: 120 WVAADCMIATPGKALRLALEALNVGRVVVAAQSNGIARAAYDAAARRAAVRTTFGQCLLD 179 V + ++ G ++A+ L GR+ +AAQS GIA AA +AA A R FG+ + Sbjct: 218 LVPKENLLGVEGDGYKIAMANLEAGRIGIAAQSLGIAEAALEAATSYAKERKQFGKSIGQ 277 Query: 180 HQGIGFKLADVATRLSAGRMLAYETARSFDTGQDVALIGAQAKLFCSEAAHDAVDIGVQV 239 Q I FKLAD+AT++ A ++L Y A+ G A + AKLF S+ A A VQ+ Sbjct: 278 QQAIAFKLADLATQVEAAKLLTYRAAQLKQQGISCAKESSMAKLFASKTAMKAAIEAVQI 337 Query: 240 FGGEGFVKPSLVERLYRDQRATEIYEGTSEIQRLVLARAI 279 FGG G+ K VER +RD + EIYEGTSEIQR+V+ + I Sbjct: 338 FGGYGYTKEYPVERYFRDAKVCEIYEGTSEIQRIVIHKHI 377 >BH3798 [I] COG1960 Acyl-CoA dehydrogenases Bha Bacillus halodurans Length = 380 Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 111/279 (39%), Positives = 164/279 (58%), Gaps = 1/279 (0%) Query: 5 GTDKQKDTYIRAMVAGRKSISFALSEREAGSDPSNMQTLATPENGGWRLRGEKRWIGGGG 64 GT++QK ++R M G+K ++ L+E +GSD +NM+T A E + L G K +I GG Sbjct: 102 GTEEQKQQFLRPMAEGKKIGAYGLTEPGSGSDAANMKTTAVLEGDDYILNGSKIFITNGG 161 Query: 65 ECAYYVVFAQTEPGAGRRGIAAFMVAADAEGVRDDAREDKMGMRGTVNSTVVL-DTWVAA 123 Y+VFA TEP +G++AF+V AD G +E K+G+R + + ++ D V Sbjct: 162 IADIYIVFAVTEPEKRHKGVSAFIVEADTPGFSVGKKEKKLGIRSSPTTEIIFEDCRVPK 221 Query: 124 DCMIATPGKALRLALEALNVGRVVVAAQSNGIARAAYDAAARRAAVRTTFGQCLLDHQGI 183 + ++ G ++A+ L+ GR +AAQ+ GIA+ A DAA A R FG+ + QGI Sbjct: 222 ENLLGKEGDGFKIAMMTLDGGRNGIAAQAVGIAQGALDAAVAYANERKQFGKPIGQQQGI 281 Query: 184 GFKLADVATRLSAGRMLAYETARSFDTGQDVALIGAQAKLFCSEAAHDAVDIGVQVFGGE 243 FKLAD+AT++ A R+L Y+ A G A +KLF + A D VQVFGG Sbjct: 282 AFKLADMATKVEASRLLTYQAAWRESEGLSYGKESAMSKLFAGDTAMDVTVEAVQVFGGY 341 Query: 244 GFVKPSLVERLYRDQRATEIYEGTSEIQRLVLARAIHAE 282 G+ K VER RD + T+IYEGT+EIQRLV+++ + A+ Sbjct: 342 GYTKEYPVERYMRDAKITQIYEGTNEIQRLVISKMLLAD 380 >RSp0652 [I] COG1960 Acyl-CoA dehydrogenases Rso Ralstonia solanacearum Length = 377 Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 119/280 (42%), Positives = 169/280 (60%), Gaps = 1/280 (0%) Query: 1 LLCAGTDKQKDTYIRAMVAGRKSISFALSEREAGSDPSNMQTLATPENGGWRLRGEKRWI 60 +L GTD QK Y+ + GR +F L+E AGS+ +N++T A P +G W L G K+++ Sbjct: 98 ILKFGTDAQKARYLPDLATGRAIGAFCLTEPHAGSEANNLRTRAVPRDGHWVLNGSKQFV 157 Query: 61 GGGGECAYYVVFAQTEPGAGRRGIAAFMVAADAEGVRDDAREDKMGMRGTVNSTVVL-DT 119 G +VFA T+P AG+RGI+AF+V G E K+G+R + + L D Sbjct: 158 TNGARAQLAIVFAVTDPDAGKRGISAFIVPTQTPGFHVGRPEHKLGIRASDTCPITLEDC 217 Query: 120 WVAADCMIATPGKALRLALEALNVGRVVVAAQSNGIARAAYDAAARRAAVRTTFGQCLLD 179 V A ++ PG+ L++AL L GR+ +AAQ+ GIARAA+DAA R A R FG+ L + Sbjct: 218 AVPAANLLGEPGEGLKIALSNLEGGRIGIAAQAVGIARAAFDAARRYANERVQFGKALRE 277 Query: 180 HQGIGFKLADVATRLSAGRMLAYETARSFDTGQDVALIGAQAKLFCSEAAHDAVDIGVQV 239 HQ I LAD+ATRL+A R+L + AR + +QAKL+ SE A + +Q+ Sbjct: 278 HQTIANMLADMATRLNAARLLVHHAARLRSADKPCLSEASQAKLYASELAEEICSKAIQI 337 Query: 240 FGGEGFVKPSLVERLYRDQRATEIYEGTSEIQRLVLARAI 279 GG G++ VER YRD R T+IYEGTSE+QR+V+AR + Sbjct: 338 HGGYGYLADYAVERHYRDARITQIYEGTSEVQRMVIARHV 377 >BS_mmgC [I] COG1960 Acyl-CoA dehydrogenases Bsu Bacillus subtilis Length = 378 Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 111/280 (39%), Positives = 165/280 (58%), Gaps = 2/280 (0%) Query: 1 LLCAGTDKQKDTYIRAMVAGRKSISFALSEREAGSDPSNMQTLATPENGGWRLRGEKRWI 60 +L G ++QK YI + +G +FAL+E +GSD +++T A +NG + L G K +I Sbjct: 96 ILYFGNEEQKMKYIPNLASGDHLGAFALTEPHSGSDAGSLRTTAIKKNGKYLLNGSKIFI 155 Query: 61 GGGGECAYYVVFAQTEPGAGRRGIAAFMVAADAEGVRDDAREDKMGMRGTVNSTVVLDT- 119 GG Y+ FA T P GR GI+AF+V + G +E K+G+ G+ + ++ D Sbjct: 156 TNGGAADIYITFALTAPDQGRHGISAFIVEKNTPGFTVGKKERKLGLYGSNTTELIFDNA 215 Query: 120 WVAADCMIATPGKALRLALEALNVGRVVVAAQSNGIARAAYDAAARRAAVRTTFGQCLLD 179 V ++ G +A+ LNVGR+ +AAQ+ GIA AA + A A R FG+ + Sbjct: 216 EVPEANLLGKEGDGFHIAMANLNVGRIGIAAQALGIAEAALEHAVDYAKQRVQFGRPIAA 275 Query: 180 HQGIGFKLADVATRLSAGRMLAYETARSFDTGQDVALIGAQAKLFCSEAAHDAVDIGVQV 239 +QGI FKLAD+ATR A R L Y A + G + + AK F S+AA A+D VQ+ Sbjct: 276 NQGISFKLADMATRAEAARHLVYHAADLHNRGLNCGKEASMAKQFASDAAVKALD-AVQI 334 Query: 240 FGGEGFVKPSLVERLYRDQRATEIYEGTSEIQRLVLARAI 279 +GG G++K VERL RD + T+IYEGT+EIQRL++++ + Sbjct: 335 YGGYGYMKDYPVERLLRDAKVTQIYEGTNEIQRLIISKYL 374 >PA2552 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aeruginosa Length = 375 Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 107/276 (38%), Positives = 164/276 (59%), Gaps = 1/276 (0%) Query: 5 GTDKQKDTYIRAMVAGRKSISFALSEREAGSDPSNMQTLATPENGGWRLRGEKRWIGGGG 64 G+ +QK+ ++R + G +FAL+E +AGSD S ++T A + + L G K++I G Sbjct: 100 GSAEQKERFLRPLAQGSMLGAFALTEPQAGSDASFLKTRARRDGDHYVLNGAKQFITSGS 159 Query: 65 ECAYYVVFAQTEPGAGRRGIAAFMVAADAEGVRDDAREDKMGMRGTVNSTVVL-DTWVAA 123 +VFA T+P AG+RGI+AF+V D G EDK+G + + D + A Sbjct: 160 HAGMVIVFAVTDPDAGKRGISAFIVPTDTPGYEVVRIEDKLGQHASDTCQLAFNDLRIPA 219 Query: 124 DCMIATPGKALRLALEALNVGRVVVAAQSNGIARAAYDAAARRAAVRTTFGQCLLDHQGI 183 + G+ R+AL L GR+ +AAQ+ G+ARAA++AA A R TFG+ +++HQ + Sbjct: 220 TLRLGEEGEGYRIALANLEGGRIGIAAQAVGMARAAFEAARDYAHERETFGKPIIEHQAV 279 Query: 184 GFKLADVATRLSAGRMLAYETARSFDTGQDVALIGAQAKLFCSEAAHDAVDIGVQVFGGE 243 F+LAD+ATR++ R + + A + G + AKLF SE A + +Q GG Sbjct: 280 AFRLADMATRIAVARQMVHHAASLREAGLPCLTEASMAKLFASEMAEEVCSAAIQTLGGY 339 Query: 244 GFVKPSLVERLYRDQRATEIYEGTSEIQRLVLARAI 279 G++K VER+YRD R +IYEGTS++QRLV+AR++ Sbjct: 340 GYLKDFPVERIYRDVRVCQIYEGTSDVQRLVIARSL 375