BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0228.p         (100 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO2149 [R] COG1741 Pirin-related protein Ype Yersinia pestis          66   2e-11

>YPO2149 [R] COG1741 Pirin-related protein Ype Yersinia pestis
          Length = 289

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 51/93 (54%)

Query: 1   VIAGDCLNRRGAMPTMSSFDVWQLQLKSRCLSEFNTVEGRTLLLAILSGSVLINGDHAAL 60
           VIAG+     G   T S  +VW ++L      EF+   G    L +L G++L+NGD  A 
Sbjct: 162 VIAGEYAGNIGPAKTFSPLNVWDIRLTQGKSCEFSLPAGWNTALIVLHGTLLVNGDAIAR 221

Query: 61  GGEVVMLDRPGAGLLLETRADTTGLLLSGEPVD 93
             E+V+LD  G  L +E   DT  LLLSGEP+D
Sbjct: 222 EAEMVLLDPTGTHLSIEANNDTVLLLLSGEPID 254