BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0220.p         (59 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3386 [P] COG1464 ABC-type metal ion transport system, peripla...    74   8e-14
AGl761 [P] COG1464 ABC-type metal ion transport system, periplas...    63   2e-10
BMEI1954 [P] COG1464 ABC-type metal ion transport system, peripl...    59   3e-09
RSc0922 [P] COG1464 ABC-type metal ion transport system, peripla...    58   6e-09

>RSc3386 [P] COG1464 ABC-type metal ion transport system, periplasmic
           component/surface antigen Rso Ralstonia solanacearum
          Length = 529

 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 33/59 (55%), Positives = 44/59 (74%), Gaps = 1/59 (1%)

Query: 1   VRDGIAVEKRENNPYVNIIVVREQDKNAAWVAPLVKAYQSEEVRQFIQKQYGGSVVPVF 59
            +D IA+E R+  PY N+I VRE+DKN  WV  LV AYQSEEVR+FI+ Q+ G+++P F
Sbjct: 472 AKDAIALEDRQG-PYANLIAVREKDKNQPWVKTLVHAYQSEEVRKFIETQFKGAILPAF 529


>AGl761 [P] COG1464 ABC-type metal ion transport system, periplasmic
           component/surface antigen Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 259

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)

Query: 2   RDGIAVEKRENNPYVNIIVVREQDKNAAWVAPLVKAYQSEEVRQFIQKQYGGSVVP 57
           +D IA+E  E +PY N+I VR QDK+  WV  LV++Y S EV+ FI ++Y G+V+P
Sbjct: 203 KDAIAIE-SEKSPYANVIAVRAQDKDKPWVKTLVESYHSPEVKAFILEKYNGTVIP 257


>BMEI1954 [P] COG1464 ABC-type metal ion transport system, periplasmic
           component/surface antigen Bme Brucella melitensis
          Length = 268

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/53 (49%), Positives = 36/53 (67%)

Query: 7   VEKRENNPYVNIIVVREQDKNAAWVAPLVKAYQSEEVRQFIQKQYGGSVVPVF 59
           V + E  PY NI+VVR  DK+A WV  L+++Y S+EV+ FI K + GSV P +
Sbjct: 216 VREGEKAPYTNILVVRTADKDADWVKTLIESYHSDEVKDFIAKTFKGSVSPAW 268


>RSc0922 [P] COG1464 ABC-type metal ion transport system, periplasmic
           component/surface antigen Rso Ralstonia solanacearum
          Length = 266

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)

Query: 1   VRDGIAVEKRENNPYVNIIVVREQDKNAAWVAPLVKAYQSEEVRQFIQKQYGGSVV 56
            RDGIA+E  +  PY N+I VR  DK+  WVA LVKAY S+ V+ F++ +Y  +V+
Sbjct: 209 TRDGIAIESPKG-PYANVIAVRAADKDQPWVAKLVKAYHSDAVKAFVKTKYKDAVI 263