BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0182.p         (73 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0691 [G] COG1109 Phosphomannomutase Rso Ralstonia solanacearum     103   1e-22
NMB0790 [G] COG1109 Phosphomannomutase Nme Neisseria meningitidi...    90   1e-18
NMA1001 [G] COG1109 Phosphomannomutase NmA Neisseria meningitidi...    89   2e-18
PA5322 [G] COG1109 Phosphomannomutase Pae Pseudomonas aeruginosa       75   3e-14
XF0151 [G] COG1109 Phosphomannomutase Xfa Xylella fastidiosa 9a5c      58   5e-09

>RSc0691 [G] COG1109 Phosphomannomutase Rso Ralstonia solanacearum
          Length = 461

 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 48/73 (65%), Positives = 60/73 (82%)

Query: 1   LQNDAKFPGAEQVITIDGLRIEYADGFGLMRSSNTTPVVVLRFEAETEQALARIQDEFRR 60
           ++ +A F GA++V  IDG+R+EYADGFGL R SNTTPVVV+RFEA+ + A+ARIQ EFRR
Sbjct: 389 IKANATFDGAKEVNRIDGVRVEYADGFGLARPSNTTPVVVMRFEADNDAAMARIQGEFRR 448

Query: 61  VILAARPDVALPF 73
           VILA +PD  LPF
Sbjct: 449 VILAEKPDAKLPF 461


>NMB0790 [G] COG1109 Phosphomannomutase Nme Neisseria meningitidis MC58
          Length = 460

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/73 (56%), Positives = 59/73 (80%), Gaps = 1/73 (1%)

Query: 1   LQNDAKFPGAEQVITIDGLRIEYADGFGLMRSSNTTPVVVLRFEAETEQALARIQDEFRR 60
           L   A+F GA ++ITIDGLR+E+ DGFGLMR+SNTTP++VLRFEA+T++A+ RIQ++F+ 
Sbjct: 389 LAAKAEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQEAIERIQNQFKA 448

Query: 61  VILAARPDVALPF 73
           VI  + P++  P 
Sbjct: 449 VI-ESNPNLIWPL 460


>NMA1001 [G] COG1109 Phosphomannomutase NmA Neisseria meningitidis Z2491
          Length = 460

 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/73 (56%), Positives = 58/73 (79%), Gaps = 1/73 (1%)

Query: 1   LQNDAKFPGAEQVITIDGLRIEYADGFGLMRSSNTTPVVVLRFEAETEQALARIQDEFRR 60
           L   A+F GA ++ITIDGLR+E+ DGFGLMR+SNTTP++VLRFEA+T+ A+ RIQ++F+ 
Sbjct: 389 LAAKAEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQAAIERIQNQFKA 448

Query: 61  VILAARPDVALPF 73
           VI  + P++  P 
Sbjct: 449 VI-ESNPNLIWPL 460


>PA5322 [G] COG1109 Phosphomannomutase Pae Pseudomonas aeruginosa
          Length = 463

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 53/73 (72%), Gaps = 1/73 (1%)

Query: 1   LQNDAKFPGAEQVITIDGLRIEYADGFGLMRSSNTTPVVVLRFEAETEQALARIQDEFRR 60
           LQ DA++ G   + T+DG+R++Y  G+GL+R+SNTTPV+VLRFEA+TE+ L RI+  FR 
Sbjct: 392 LQRDAQW-GEGNITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRN 450

Query: 61  VILAARPDVALPF 73
            + A    + +PF
Sbjct: 451 QLKAVDSSLPVPF 463


>XF0151 [G] COG1109 Phosphomannomutase Xfa Xylella fastidiosa 9a5c
          Length = 467

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 7   FPGAEQVITIDGLRIEYADGFGLMRSSNTTPVVVLRFEAETEQALARIQDEFRRVILAAR 66
           F GA ++   DGLR ++ DG+GL+R S+T   +VLRFEA+T+  L RIQ  FR  + A  
Sbjct: 402 FDGA-RLFAFDGLRADFTDGWGLVRVSDTASALVLRFEADTQAGLERIQSAFRTHLQALL 460

Query: 67  PDVALPF 73
           P   L F
Sbjct: 461 PGQILVF 467