BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0172.p (262 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value jhp0094 [M] COG0463 Glycosyltransferases involved in cell wall b... 125 1e-28 HP0102 [M] COG0463 Glycosyltransferases involved in cell wall bi... 123 5e-28 YPO3098 [M] COG0463 Glycosyltransferases involved in cell wall b... 103 4e-22 slr1065 [M] COG0463 Glycosyltransferases involved in cell wall b... 100 6e-21 Rv2957 [M] COG0463 Glycosyltransferases involved in cell wall bi... 88 2e-17 >jhp0094 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis jHp Helicobacter pylori J99 Length = 260 Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/245 (33%), Positives = 136/245 (55%), Gaps = 16/245 (6%) Query: 20 ITIITAVFNAQKTLAATIESVINQSYDNIEFIIVDGGSTDASVDIMRKYDQYIDYWVSQP 79 +++ITA FN++KT+ TI SV+NQ+Y NIE+II+DG S D++++I++KY I +S+ Sbjct: 4 VSVITACFNSEKTIEDTILSVLNQTYKNIEYIIIDGASADSTLEIIQKYKDRIACVMSEK 63 Query: 80 DAGIYDAWNRGVKLASGDWLAFLGADDAYLSG-AIDGYVDFLANHPSGTLEFVSSKVSLV 138 D GIYDA N+G+K +SGD +A L +DD Y ++ V N + V + +V Sbjct: 64 DEGIYDAMNKGIKRSSGDIIALLNSDDFYKDEFVVEKVVHEFENKNCDS---VYGDLGVV 120 Query: 139 KD---TKVLREVGHAWRWSIFRQYMGV--AHVGAMHRRTLFEKYGLFDDSFKICGDYELL 193 K KV+R + +S GV AH ++ ++E+YGL+ +KI D+E++ Sbjct: 121 KPDCLEKVVRYY-ESGEFSPKTLLYGVVPAHPTLFVKKAIYERYGLYKTDYKISADFEMI 179 Query: 194 LR--PRDRLGADFFDEVTVNMEVGGVSDANVRVF----DEAARAKILSGKRSVLLSHLEK 247 +R ++ + EV V M GGVS + + E RA +G ++ + S L K Sbjct: 180 IRLFVVQKISFSYLKEVLVIMRTGGVSASGFKSLLLRNKENLRACQENGIQANVFSMLLK 239 Query: 248 HWAKL 252 + K+ Sbjct: 240 YPRKI 244 >HP0102 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Hpy Helicobacter pylori 26695 Length = 259 Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 80/244 (32%), Positives = 137/244 (56%), Gaps = 14/244 (5%) Query: 20 ITIITAVFNAQKTLAATIESVINQSYDNIEFIIVDGGSTDASVDIMRKYDQYIDYWVSQP 79 +++ITA FN++KT+ TI SV++Q+Y NIE+II+DG STD++++I++K+ I +S+ Sbjct: 4 VSVITACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASTDSTLEIIQKHRDKIACVMSEK 63 Query: 80 DAGIYDAWNRGVKLASGDWLAFLGADDAYLSGAIDGYVDFLANHPSGTLEFVSSKVSLVK 139 D GIYDA N+G+K +SGD +A L +DD Y + V + + V + + VK Sbjct: 64 DEGIYDAMNKGIKRSSGDIIALLNSDDFYKDEFVVEKV--VHEFERKNCDSVYADLVFVK 121 Query: 140 D---TKVLR--EVGHAWRWSIFRQYMGVAHVGAMHRRTLFEKYGLFDDSFKICGDYELLL 194 KV+R E+G ++ + AH ++ ++E+YGL+ +KI D+E+++ Sbjct: 122 PDCLEKVVRYYEIGEFNPKTLLYGVVP-AHPTLFVKKAIYERYGLYKTDYKISADFEMII 180 Query: 195 R--PRDRLGADFFDEVTVNMEVGGVSDANVRVF----DEAARAKILSGKRSVLLSHLEKH 248 R ++ + EV V M GGVS + + E RA +G ++ + S L K+ Sbjct: 181 RLFVVQKISFSYLKEVLVVMRTGGVSASGFKSLLLRNKENIRACKENGIQANVFSMLLKY 240 Query: 249 WAKL 252 K+ Sbjct: 241 PRKI 244 >YPO3098 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Ype Yersinia pestis Length = 247 Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 115/214 (53%), Gaps = 24/214 (11%) Query: 20 ITIITAVFNAQKTLAATIESVINQSYDNIEFIIVDGGSTDASVDIMRKYDQYIDYWVSQP 79 I+IITA +N+++T++ T+ S+ Q+Y ++E+IIVDG S D ++ ++ + + +S+ Sbjct: 3 ISIITATYNSERTISDTLSSLEKQTYLDVEYIIVDGASKDNTLTVISQNSTRVTKIISES 62 Query: 80 DAGIYDAWNRGVKLASGDWLAFLGADD--AYLSGAIDGYVDFLANHPS----GTLEFVSS 133 D GIYDA N+G+ LA+GD + FL +DD AY GA+ V+ G L++V+ Sbjct: 63 DQGIYDALNKGIDLATGDIIGFLHSDDLLAY-PGALSDIVETFEKQQCDAVYGDLQYVAK 121 Query: 134 KVSLVKDTKVLREVGHAWRWSIFRQ------YMGVAHVGAMHRRTLFEKYGLFDDSFKIC 187 L +V W+ F +M H +R L+ ++G FD S+KI Sbjct: 122 --------NDLNKVIRCWKSGFFNHEKMKYGWMP-PHPTFYMKRDLYIRFGGFDLSYKIS 172 Query: 188 GDYELLLR--PRDRLGADFFDEVTVNMEVGGVSD 219 DY+ L R ++ + +V + M VGG+S+ Sbjct: 173 ADYDSLTRYIINYKIKIAYLPKVIIKMRVGGISN 206 >slr1065 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Syn Synechocystis Length = 356 Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 46/91 (50%), Positives = 64/91 (70%) Query: 18 PLITIITAVFNAQKTLAATIESVINQSYDNIEFIIVDGGSTDASVDIMRKYDQYIDYWVS 77 P I+I+T +N + + TI SV+ Q Y N+E+I+VDGGSTD +V I+RKY++Y+ YW S Sbjct: 43 PKISIVTPSYNYGQFIEETIRSVLLQGYPNLEYIVVDGGSTDNTVTIIRKYEKYLKYWAS 102 Query: 78 QPDAGIYDAWNRGVKLASGDWLAFLGADDAY 108 +PD G DA N+G + SGD A+L ADD Y Sbjct: 103 EPDHGQTDAINKGYRYCSGDVFAWLNADDLY 133 >Rv2957 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Mtu Mycobacterium tuberculosis H37Rv Length = 275 Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 27/210 (12%) Query: 1 LRTRGYFKRSTANDER----RPLITIITAVFNAQKTLAATIESVINQSYDNIEFIIVDGG 56 ++T+ Y + AN ++ P+ +II N L A ++S+ Q+ + E ++VDGG Sbjct: 2 VQTKRYAGLTAANTKKVAMAAPMFSIIIPTLNVAAVLPACLDSIARQTCGDFELVLVDGG 61 Query: 57 STDASVDIMRKYDQYIDYWV---SQPDAGIYDAWNRGVKLASGDWLAFLGADDA-YLSGA 112 STD ++DI + + + D G+YDA NRGV LA+G WL FLGADD+ Y + Sbjct: 62 STDETLDIANIFAPNLGERLIIHRDTDQGVYDAMNRGVDLATGTWLLFLGADDSLYEADT 121 Query: 113 IDGYVDFLANH-PSGTLEFVSSKVSLVKDTKVLREVGHAWRWS------IFRQYMGVAHV 165 + F+ H PS LV ++R W + +F++ + H Sbjct: 122 LARVAAFIGEHEPS----------DLVYGDVIMRSTNFRWGGAFDLDRLLFKR--NICHQ 169 Query: 166 GAMHRRTLFEKYGLFDDSFKICGDYELLLR 195 +RR LF G ++ +++ D++ +R Sbjct: 170 AIFYRRGLFGTIGPYNLRYRVLADWDFNIR 199