BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0103.p         (162 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

all4145 [P] COG0783 DNA-binding ferritin-like protein (oxidative...   269   2e-72
RSc2687 [P] COG0783 DNA-binding ferritin-like protein (oxidative...   263   1e-70
PA0962 [P] COG0783 DNA-binding ferritin-like protein (oxidative ...   247   7e-66
XF1382 [P] COG0783 DNA-binding ferritin-like protein (oxidative ...   211   8e-55
slr1894 [P] COG0783 DNA-binding ferritin-like protein (oxidative...   199   2e-51

>all4145 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage
           protectant) Nos Nostoc sp. PCC 7120
          Length = 163

 Score =  269 bits (687), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 125/160 (78%), Positives = 140/160 (87%)

Query: 2   AKKNVAAINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFEGQ 61
           ++  +  +NIGI++ +R KIA+GLS+LLADTYTLYLKTHNFHWNVTGPMF TLHLMFE Q
Sbjct: 3   SQGTINNVNIGIDEANRAKIAEGLSRLLADTYTLYLKTHNFHWNVTGPMFQTLHLMFETQ 62

Query: 62  YTELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEAEGVPAAEEMIRQLVAGQEAVTR 121
           YTELALAVDL+AERIRALGYPAPG+Y E+AKLSSIPE  GVP A+EMIR LV GQEAV R
Sbjct: 63  YTELALAVDLVAERIRALGYPAPGTYSEYAKLSSIPETPGVPKAKEMIRLLVEGQEAVVR 122

Query: 122 TARSMFPAVDAAADEPTADLLTQRMQLHEKNAWMLRSLLE 161
           TARS+FP VD   DEPTADLLTQRMQ+HEK AWMLRSLLE
Sbjct: 123 TARSIFPVVDEVNDEPTADLLTQRMQVHEKTAWMLRSLLE 162


>RSc2687 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage
           protectant) Rso Ralstonia solanacearum
          Length = 166

 Score =  263 bits (671), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 123/146 (84%), Positives = 135/146 (92%)

Query: 15  DKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFEGQYTELALAVDLIAE 74
           +KDRKKIA+GLS+LLADTY+LYLKTHNFHWNVTGPMFNTLHLMFE QY EL  AVD +AE
Sbjct: 20  EKDRKKIAEGLSRLLADTYSLYLKTHNFHWNVTGPMFNTLHLMFETQYNELWTAVDSVAE 79

Query: 75  RIRALGYPAPGSYKEFAKLSSIPEAEGVPAAEEMIRQLVAGQEAVTRTARSMFPAVDAAA 134
           RIRALGYPAPGSY EFA+LSSIPEA+GVPAAE+MIR+LVAG E+VTRTARS+FP VD AA
Sbjct: 80  RIRALGYPAPGSYSEFARLSSIPEAKGVPAAEDMIRELVAGHESVTRTARSLFPDVDKAA 139

Query: 135 DEPTADLLTQRMQLHEKNAWMLRSLL 160
           DEPTADLLTQRM +HEK AWMLRSLL
Sbjct: 140 DEPTADLLTQRMDIHEKTAWMLRSLL 165


>PA0962 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage
           protectant) Pae Pseudomonas aeruginosa
          Length = 156

 Score =  247 bits (631), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 124/152 (81%), Positives = 137/152 (90%)

Query: 9   INIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFEGQYTELALA 68
           INIGI ++DR  IA+GLS+LLADTYTLYLKTHNFHWNVTGPMFNTLHLMFEGQYTELA+A
Sbjct: 3   INIGIGEQDRAAIAEGLSRLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFEGQYTELAVA 62

Query: 69  VDLIAERIRALGYPAPGSYKEFAKLSSIPEAEGVPAAEEMIRQLVAGQEAVTRTARSMFP 128
           VD IAERIRALG+PAPG+Y  +A+LSSI E EGVP AEEMIRQLV GQEAV RTARS+FP
Sbjct: 63  VDDIAERIRALGFPAPGTYAAYARLSSIKEEEGVPEAEEMIRQLVQGQEAVVRTARSIFP 122

Query: 129 AVDAAADEPTADLLTQRMQLHEKNAWMLRSLL 160
            +D  +DEPTADLLTQRMQ+HEK AWMLRSLL
Sbjct: 123 LLDKVSDEPTADLLTQRMQVHEKTAWMLRSLL 154


>XF1382 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage
           protectant) Xfa Xylella fastidiosa 9a5c
          Length = 196

 Score =  211 bits (536), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 100/156 (64%), Positives = 120/156 (76%), Gaps = 3/156 (1%)

Query: 9   INIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFEGQYTELALA 68
           +NIGI + DRK IA+GLS  +AD +TLYLKTH FHWNVTGPMFN+LH MFE QYTE   A
Sbjct: 41  VNIGIKNSDRKAIAEGLSHYMADAFTLYLKTHTFHWNVTGPMFNSLHTMFETQYTEQWAA 100

Query: 69  VDLIAERIRALGYPAPGSYKEFAKLSSIPEAEGV---PAAEEMIRQLVAGQEAVTRTARS 125
           +D IAERIRALGY APGSYK++ +L+SI E  G+       EM+RQLV G EAV RTAR 
Sbjct: 101 LDEIAERIRALGYNAPGSYKDYLELTSIKEEPGLNDNTDWREMVRQLVIGNEAVCRTARK 160

Query: 126 MFPAVDAAADEPTADLLTQRMQLHEKNAWMLRSLLE 161
           +    +  +D+PTADLLTQR+Q+HEK AWMLRSLL+
Sbjct: 161 VLDTAEDGSDDPTADLLTQRLQIHEKYAWMLRSLLQ 196


>slr1894 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage
           protectant) Syn Synechocystis
          Length = 156

 Score =  199 bits (505), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 93/154 (60%), Positives = 114/154 (74%)

Query: 6   VAAINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFEGQYTEL 65
           +A INIGI + DR KIA+ L KLLADTYTLYL+THNFHWNVTGP F  LHLMFE QY EL
Sbjct: 1   MATINIGIPEADRIKIAESLKKLLADTYTLYLQTHNFHWNVTGPQFRDLHLMFEEQYNEL 60

Query: 66  ALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEAEGVPAAEEMIRQLVAGQEAVTRTARS 125
           ALAVD IAERIR+L   APG+YKEFAKLSS+ E +G+P ++EM+  L  G E + ++ R 
Sbjct: 61  ALAVDDIAERIRSLDVFAPGTYKEFAKLSSVQEVDGIPTSKEMVDILTKGHETIVQSCRD 120

Query: 126 MFPAVDAAADEPTADLLTQRMQLHEKNAWMLRSL 159
           +      A DE T  L + RM++HEK AWMLR++
Sbjct: 121 VLKCSQPADDESTIALASDRMRVHEKTAWMLRAM 154