BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0084.p (303 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1857 [S] COG2354 Uncharacterized protein conserved in bacteria... 393 e-109 yedI [S] COG2354 Uncharacterized protein conserved in bacteria E... 325 5e-89 ECs2696 [S] COG2354 Uncharacterized protein conserved in bacteri... 325 7e-89 ZyedI [S] COG2354 Uncharacterized protein conserved in bacteria ... 322 8e-88 STM1989 [S] COG2354 Uncharacterized protein conserved in bacteri... 318 7e-87 >PA1857 [S] COG2354 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 307 Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust. Identities = 204/305 (66%), Positives = 240/305 (78%), Gaps = 3/305 (0%) Query: 1 MAGSSFFALIDDIAGILDDVSAMTKVAAKKTAGVLGDDLALNAQQVSGVNADRELPVVWA 60 MAG+S L+DDIA +LDDVS MTKVAAKKTAGVLGDDLALNAQQV+GVNADRELPVVWA Sbjct: 1 MAGASLLTLLDDIAAVLDDVSLMTKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWA 60 Query: 61 VAVGSLKNKAILVPAALAISAFAPWAVTPLLMLGGAFLCFEGFEKLAHKYLPHEDEHHGE 120 VA GSL+NKAILVPAAL ISAFAPWAV PLLMLGGA+LCFEGFEK+AHKYLPH+DEH E Sbjct: 61 VAKGSLRNKAILVPAALLISAFAPWAVIPLLMLGGAYLCFEGFEKIAHKYLPHDDEHADE 120 Query: 121 AAAPEAMES---EQDKIKGAIRTDFILSAEIIAITLGTVADAPLQQQITVLIGIALIMTV 177 AA ++ E+ KI GAIRTDFILSAEIIAITLGTVA++ Q+ VL+GIAL+MT+ Sbjct: 121 AALAANVDVAALEKQKIGGAIRTDFILSAEIIAITLGTVAESSFTTQVLVLVGIALVMTI 180 Query: 178 GVYGVVAGIVKLDDGGLYLLRTGGAIGRRIGRAILVAAPYMMKSLTVIGTVAMFMVGGGI 237 GVYG+VAGIVKLDD GLYL R + +G AIL APY+MK L+V+G AMFMVGGGI Sbjct: 181 GVYGLVAGIVKLDDAGLYLSRRDSGFAQGLGGAILRTAPYLMKGLSVVGMAAMFMVGGGI 240 Query: 238 LTHGFAPVHHWIADVSAPLAAVPAIGGLLSVLAPSALDAVFGVVAGGAVLLLVTLMQRVL 297 LTHG VHH I + +A + +G LL+ + P+ L+ +FG+VAG VL V L++R+L Sbjct: 241 LTHGIPVVHHAIEQAAQSVAGIATLGPLLAAITPTLLNFLFGIVAGAVVLAGVLLVKRLL 300 Query: 298 KVFKK 302 KK Sbjct: 301 PKKKK 305 >yedI [S] COG2354 Uncharacterized protein conserved in bacteria Eco Escherichia coli K12 Length = 305 Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 172/304 (56%), Positives = 225/304 (74%), Gaps = 14/304 (4%) Query: 1 MAGSSFFALIDDIAGILDDVSAMTKVAAKKTAGVLGDDLALNAQQVSGVNADRELPVVWA 60 +AGSS L+DDIA +LDD+S M K+AAKKTAGVLGDDL+LNAQQVSGV A+RELPVVW Sbjct: 3 LAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG 62 Query: 61 VAVGSLKNKAILVPAALAISAFAPWAVTPLLMLGGAFLCFEGFEKL-------AHKYLPH 113 VA GSL NK ILVP AL ISAF PWA+TPLLM+GGAFLCFEG EK+ HK P Sbjct: 63 VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPA 122 Query: 114 EDEHHGEA-AAPEAMESEQDKIKGAIRTDFILSAEIIAITLGTVADAPLQQQITVLIGIA 172 + + E AA + ++ E+DKIKGAIRTDFILSAEI+AITLG VA+APL Q+ VL GIA Sbjct: 123 QSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIA 182 Query: 173 LIMTVGVYGVVAGIVKLDDGGLYLLRTGGAIGRRIGRAILVAAPYMMKSLTVIGTVAMFM 232 L++TVGVYG+V IVK+DD G +L A+ + +G+ +L+ AP++MK+L+++GT+AMF+ Sbjct: 183 LVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFL 242 Query: 233 VGGGILTHGFAPVHHWIADVSAPLAAVPAIGGLLSVLAPSALDAVFGVVAGGAVLLLVTL 292 VGGGI+ HG AP+HH I + +AV A+ + P+ L+ + G + GG V+L V Sbjct: 243 VGGGIVVHGIAPLHHAIEHFAGQQSAVVAM------ILPTVLNLILGFIIGGIVVLGVKA 296 Query: 293 MQRV 296 ++++ Sbjct: 297 VEKM 300 >ECs2696 [S] COG2354 Uncharacterized protein conserved in bacteria Ecs Escherichia coli O157:H7 Length = 305 Score = 325 bits (834), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 171/296 (57%), Positives = 220/296 (74%), Gaps = 14/296 (4%) Query: 1 MAGSSFFALIDDIAGILDDVSAMTKVAAKKTAGVLGDDLALNAQQVSGVNADRELPVVWA 60 +AGSS L+DDIA +LDD+S M K+AAKKTAGVLGDDL+LNAQQVSGV A+RELPVVW Sbjct: 3 LAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG 62 Query: 61 VAVGSLKNKAILVPAALAISAFAPWAVTPLLMLGGAFLCFEGFEKL-------AHKYLPH 113 VA GSL NK ILVP AL ISAF PWA+TPLLM+GGAFLCFEG EK+ HK P Sbjct: 63 VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPA 122 Query: 114 EDEHHGEA-AAPEAMESEQDKIKGAIRTDFILSAEIIAITLGTVADAPLQQQITVLIGIA 172 + + E AA + ++ E+DKIKGAIRTDFILSAEI+AITLG VA+APL Q+ VL GIA Sbjct: 123 QSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIA 182 Query: 173 LIMTVGVYGVVAGIVKLDDGGLYLLRTGGAIGRRIGRAILVAAPYMMKSLTVIGTVAMFM 232 L++TVGVYG+V IVK+DD G +L A+ + +G+ +L+ AP++MK+L+++GT+AMF+ Sbjct: 183 LVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFL 242 Query: 233 VGGGILTHGFAPVHHWIADVSAPLAAVPAIGGLLSVLAPSALDAVFGVVAGGAVLL 288 VGGGI+ HG AP+HH I + +AV A+ + P+ L+ + G + GG V+L Sbjct: 243 VGGGIVVHGIAPLHHAIEHFAGQQSAVVAM------ILPTVLNLILGFIIGGIVVL 292 >ZyedI [S] COG2354 Uncharacterized protein conserved in bacteria EcZ Escherichia coli O157:H7 EDL933 Length = 305 Score = 322 bits (824), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 169/296 (57%), Positives = 218/296 (73%), Gaps = 14/296 (4%) Query: 1 MAGSSFFALIDDIAGILDDVSAMTKVAAKKTAGVLGDDLALNAQQVSGVNADRELPVVWA 60 +AGSS L+DDIA +LDD+S M K+AAKKTAGVLGDDL+LNAQQVSGV A+RELPVVW Sbjct: 3 LAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG 62 Query: 61 VAVGSLKNKAILVPAALAISAFAPWAVTPLLMLGGAFLCFEGFEKL-------AHKYLPH 113 VA GSL NK ILVP AL ISAF PWA+TPLLM+GGAFLCFEG EK+ HK P Sbjct: 63 VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEXRKHKEDPA 122 Query: 114 EDEHHGEA-AAPEAMESEQDKIKGAIRTDFILSAEIIAITLGTVADAPLQQQITVLIGIA 172 + + E AA + ++ E+DKIKGAIRTDFILSAEI+AITLG VA+APL Q+ L GIA Sbjct: 123 QSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLXLSGIA 182 Query: 173 LIMTVGVYGVVAGIVKLDDGGLYLLRTGGAIGRRIGRAILVAAPYMMKSLTVIGTVAMFM 232 L++TVGVYG+ IVK+DD G +L A+ + +G+ +L+ AP++MK+L+++GT+AMF+ Sbjct: 183 LVVTVGVYGLXGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFL 242 Query: 233 VGGGILTHGFAPVHHWIADVSAPLAAVPAIGGLLSVLAPSALDAVFGVVAGGAVLL 288 VGGGI+ HG AP+HH I + +AV A+ + P+ L+ + G + GG V+L Sbjct: 243 VGGGIVVHGIAPLHHAIEHFAGQQSAVVAM------ILPTVLNLILGFIIGGIVVL 292 >STM1989 [S] COG2354 Uncharacterized protein conserved in bacteria Sty Salmonella typhimurium LT2 Length = 303 Score = 318 bits (816), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 170/298 (57%), Positives = 215/298 (72%), Gaps = 14/298 (4%) Query: 1 MAGSSFFALIDDIAGILDDVSAMTKVAAKKTAGVLGDDLALNAQQVSGVNADRELPVVWA 60 MAGSS L+DDIA +LDD+S M K+AAKKTAGVLGDDL+LNAQQV+GV A+RELPVVW+ Sbjct: 1 MAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVTGVRANRELPVVWS 60 Query: 61 VAVGSLKNKAILVPAALAISAFAPWAVTPLLMLGGAFLCFEGFEKL-------AHKYLPH 113 VA GSL NK ILVP AL ISAF PWA+TPLLMLGGAFLCFEG EK+ HK P Sbjct: 61 VAKGSLINKVILVPLALLISAFIPWAITPLLMLGGAFLCFEGVEKVLHTFEARKHKEDPA 120 Query: 114 EDEHHGEA-AAPEAMESEQDKIKGAIRTDFILSAEIIAITLGTVADAPLQQQITVLIGIA 172 E + EA AA + E+DK+KGA+RTDFILSAEI+AITLG VA APL Q+ VL GIA Sbjct: 121 ERQKRLEALAAQNPLAFEKDKVKGAVRTDFILSAEIVAITLGIVAQAPLLNQVLVLAGIA 180 Query: 173 LIMTVGVYGVVAGIVKLDDGGLYLLRTGGAIGRRIGRAILVAAPYMMKSLTVIGTVAMFM 232 L++T+GVYG+V IVKLDD G +L + + +G+ +L+ AP++MK+L+++GT+AMF+ Sbjct: 181 LVVTIGVYGLVGIIVKLDDMGYWLAEKRSVLAQGVGKGLLIIAPWLMKALSIVGTLAMFL 240 Query: 233 VGGGILTHGFAPVHHWIADVSAPLAAVPAIGGLLSVLAPSALDAVFGVVAGGAVLLLV 290 VGGGI+ HG AP+HH I + G ++ P+ L+ V G + G V+ LV Sbjct: 241 VGGGIVVHGIAPLHHAIEHFAQQQ------GAFMAHTIPAGLNLVLGFIIGAIVVALV 292