BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0073.p         (135 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0497 Non COG                                                       190   8e-49
PA5079 [J] COG1490 D-Tyr-tRNAtyr deacylase Pae Pseudomonas aerug...   157   5e-39
HI0670 [J] COG1490 D-Tyr-tRNAtyr deacylase Hin Haemophilus influ...   148   3e-36
YPO0029 [J] COG1490 D-Tyr-tRNAtyr deacylase Ype Yersinia pestis       147   6e-36
dtd [J] COG1490 D-Tyr-tRNAtyr deacylase Eco Escherichia coli K12      143   9e-35

>RSc0497 Non COG
          Length = 166

 Score =  190 bits (482), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 94/140 (67%), Positives = 110/140 (78%), Gaps = 5/140 (3%)

Query: 1   VEGEQIGAIGPGLMVLVCAERGDTVREADALLTKLLAYRVFADDAGKMNRSVTDVQG--- 57
           V+G  +G IGPGL+ LVCAERGDTV EAD LL KLL YRVF+D  GKMN  V ++ G   
Sbjct: 15  VDGRVVGEIGPGLLALVCAERGDTVAEADRLLEKLLNYRVFSDAQGKMNLPVRNIDGNGL 74

Query: 58  --GLLLVPQFTLAADTRSGTRPSFTPAAAPAEGRQLFDHFVAQAKARHGVVETGRFGADM 115
             GLL+V QFTLAADT+SGTRPSFTPAAAP  GR+L++HFVA+A+ +H +V TG FGA M
Sbjct: 75  AGGLLVVSQFTLAADTKSGTRPSFTPAAAPEAGRRLYEHFVARARQQHPIVATGEFGAMM 134

Query: 116 QVSLTNDGPVTFWLQLKPAA 135
           QVSL NDGPVTFWLQ+ P A
Sbjct: 135 QVSLVNDGPVTFWLQVAPQA 154


>PA5079 [J] COG1490 D-Tyr-tRNAtyr deacylase Pae Pseudomonas aeruginosa
          Length = 145

 Score =  157 bits (398), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 82/130 (63%), Positives = 95/130 (73%)

Query: 1   VEGEQIGAIGPGLMVLVCAERGDTVREADALLTKLLAYRVFADDAGKMNRSVTDVQGGLL 60
           V GE +G+I  GL+VLV  E  D  R A  +L KLL YRVF DD GKMNRS+ DVQGGLL
Sbjct: 15  VGGEIVGSIDRGLLVLVGVEPEDGERCAAKMLHKLLNYRVFGDDEGKMNRSLLDVQGGLL 74

Query: 61  LVPQFTLAADTRSGTRPSFTPAAAPAEGRQLFDHFVAQAKARHGVVETGRFGADMQVSLT 120
           LV QFTLAA+TRSG RPSF+ AA PA+G  +F+H V  A+  +  V TGRFGADMQV L 
Sbjct: 75  LVSQFTLAANTRSGLRPSFSSAAPPAQGEAVFEHLVKLAREAYPQVATGRFGADMQVHLV 134

Query: 121 NDGPVTFWLQ 130
           NDGPVTF L+
Sbjct: 135 NDGPVTFLLE 144


>HI0670 [J] COG1490 D-Tyr-tRNAtyr deacylase Hin Haemophilus influenzae
          Length = 144

 Score =  148 bits (373), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 72/131 (54%), Positives = 93/131 (70%), Gaps = 1/131 (0%)

Query: 1   VEGEQIGAIGPGLMVLVCAERGDTVREADALLTKLLAYRVFADDAGKMNRSVTDVQGGLL 60
           V+GE IG IG GL+VL+  E+ D   +AD L  K+L YR+F+D+  KMN +V   QG LL
Sbjct: 15  VKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDENDKMNLNVQQAQGELL 74

Query: 61  LVPQFTLAADTRSGTRPSFTPAAAPAEGRQLFDHFVAQAKARHGVVETGRFGADMQVSLT 120
           +V QFTLAADT+ G RPSF+  A+PA   +L+++F+ Q  A    V TG+F ADMQVSLT
Sbjct: 75  IVSQFTLAADTQKGLRPSFSKGASPALANELYEYFI-QKCAEKLPVSTGQFAADMQVSLT 133

Query: 121 NDGPVTFWLQL 131
           NDGPVTFWL +
Sbjct: 134 NDGPVTFWLNV 144


>YPO0029 [J] COG1490 D-Tyr-tRNAtyr deacylase Ype Yersinia pestis
          Length = 145

 Score =  147 bits (371), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 70/131 (53%), Positives = 92/131 (70%)

Query: 1   VEGEQIGAIGPGLMVLVCAERGDTVREADALLTKLLAYRVFADDAGKMNRSVTDVQGGLL 60
           VEG  +G IGPGL+VL+  E+GDT ++A  L  ++L YR+F+D+  KMN +V    G +L
Sbjct: 15  VEGNIVGEIGPGLLVLLGVEQGDTEQKAQRLCERVLGYRIFSDENDKMNLNVQQAGGSVL 74

Query: 61  LVPQFTLAADTRSGTRPSFTPAAAPAEGRQLFDHFVAQAKARHGVVETGRFGADMQVSLT 120
           +V QFTL ADT+ G RPSF+  A P E  +L+ +FVAQ + R    ETG F ADM+VSL 
Sbjct: 75  VVSQFTLVADTQKGMRPSFSRGAIPQEADRLYQYFVAQCRERGVKTETGLFAADMKVSLV 134

Query: 121 NDGPVTFWLQL 131
           NDGPVTFWLQ+
Sbjct: 135 NDGPVTFWLQV 145


>dtd [J] COG1490 D-Tyr-tRNAtyr deacylase Eco Escherichia coli K12
          Length = 145

 Score =  143 bits (361), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 68/131 (51%), Positives = 90/131 (68%)

Query: 1   VEGEQIGAIGPGLMVLVCAERGDTVREADALLTKLLAYRVFADDAGKMNRSVTDVQGGLL 60
           VEGE  G IG GL+VL+  E+ D  ++A+ L  ++L YR+F+D  GKMN +V    G +L
Sbjct: 15  VEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEGKMNLNVQQAGGSVL 74

Query: 61  LVPQFTLAADTRSGTRPSFTPAAAPAEGRQLFDHFVAQAKARHGVVETGRFGADMQVSLT 120
           +V QFTLAADT  G RPSF+  A+P     L+D+FV + + +    +TGRF ADMQVSL 
Sbjct: 75  VVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMNTQTGRFAADMQVSLV 134

Query: 121 NDGPVTFWLQL 131
           NDGPVTFWLQ+
Sbjct: 135 NDGPVTFWLQV 145