BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0055.p         (70 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2786 [I] COG0511 Biotin carboxyl carrier protein Rso Ralstoni...   119   2e-27
NMB1860 [I] COG0511 Biotin carboxyl carrier protein Nme Neisseri...   108   2e-24
NMA0597 [I] COG0511 Biotin carboxyl carrier protein NmA Neisseri...   108   2e-24
STM3379 [I] COG0511 Biotin carboxyl carrier protein Sty Salmonel...   102   3e-22
accB [I] COG0511 Biotin carboxyl carrier protein Eco Escherichia...   101   5e-22

>RSc2786 [I] COG0511 Biotin carboxyl carrier protein Rso Ralstonia
           solanacearum
          Length = 155

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 63/70 (90%)

Query: 1   MVGTFYRSSAPGAPAFVEVGKEVKEGETICIIEAMKLLNEIDADKAGVIKQILVENGQPV 60
           MVGTFYRS +PGA AFV VG  VKEG+T+CIIEAMKLLNEI+ADKAGVIK +LVENGQ V
Sbjct: 86  MVGTFYRSPSPGAAAFVNVGDTVKEGQTLCIIEAMKLLNEIEADKAGVIKDVLVENGQAV 145

Query: 61  EFGQPLFVIG 70
           E+GQPLFVIG
Sbjct: 146 EYGQPLFVIG 155


>NMB1860 [I] COG0511 Biotin carboxyl carrier protein Nme Neisseria
           meningitidis MC58
          Length = 151

 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 49/70 (70%), Positives = 62/70 (88%)

Query: 1   MVGTFYRSSAPGAPAFVEVGKEVKEGETICIIEAMKLLNEIDADKAGVIKQILVENGQPV 60
           MVGTFYR+  P A  FVEVG++VK G+T+CIIEAMKL+NEI+A+K+G +K+ILVENG PV
Sbjct: 82  MVGTFYRAPGPNAAPFVEVGQQVKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPV 141

Query: 61  EFGQPLFVIG 70
           EFG+PLF+IG
Sbjct: 142 EFGEPLFIIG 151


>NMA0597 [I] COG0511 Biotin carboxyl carrier protein NmA Neisseria
           meningitidis Z2491
          Length = 151

 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 49/70 (70%), Positives = 62/70 (88%)

Query: 1   MVGTFYRSSAPGAPAFVEVGKEVKEGETICIIEAMKLLNEIDADKAGVIKQILVENGQPV 60
           MVGTFYR+  P A  FVEVG++VK G+T+CIIEAMKL+NEI+A+K+G +K+ILVENG PV
Sbjct: 82  MVGTFYRAPGPNAAPFVEVGQQVKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPV 141

Query: 61  EFGQPLFVIG 70
           EFG+PLF+IG
Sbjct: 142 EFGEPLFIIG 151


>STM3379 [I] COG0511 Biotin carboxyl carrier protein Sty Salmonella
           typhimurium LT2
          Length = 156

 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 60/69 (86%)

Query: 1   MVGTFYRSSAPGAPAFVEVGKEVKEGETICIIEAMKLLNEIDADKAGVIKQILVENGQPV 60
           MVGTFYR+ +P A AF+EVG++V  G+T+CI+EAMK++N+I+ADKAG +K ILVE+GQPV
Sbjct: 87  MVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKAGTVKAILVESGQPV 146

Query: 61  EFGQPLFVI 69
           EF +PL VI
Sbjct: 147 EFDEPLVVI 155


>accB [I] COG0511 Biotin carboxyl carrier protein Eco Escherichia coli
           K12
          Length = 156

 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 60/69 (86%)

Query: 1   MVGTFYRSSAPGAPAFVEVGKEVKEGETICIIEAMKLLNEIDADKAGVIKQILVENGQPV 60
           MVGTFYR+ +P A AF+EVG++V  G+T+CI+EAMK++N+I+ADK+G +K ILVE+GQPV
Sbjct: 87  MVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPV 146

Query: 61  EFGQPLFVI 69
           EF +PL VI
Sbjct: 147 EFDEPLVVI 155