BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0070.p         (311 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YLL056c [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Sce...   125   9e-29
SPBC2A9.02 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases ...   122   9e-28
mll2153 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Mlo...   110   3e-24

>YLL056c [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Sce
           Saccharomyces cerevisiae
          Length = 298

 Score =  125 bits (315), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 145/305 (47%), Gaps = 32/305 (10%)

Query: 4   NIFIIGASGFVGSMLAKHFLADGQRVSGLARTDAAEAVLRTA--GTSVIRGDLDANVAPV 61
            +FI GASGF+GS +    ++ G  V GLAR+D A A +++      ++RGDL  ++  +
Sbjct: 2   KVFITGASGFIGSAVLSELISSGHEVVGLARSDEAAAKIKSIDPAAKILRGDL-KDLEIL 60

Query: 62  LAAARSADVTIYAAQV----AFEREPTIIRT----LCEALAGSGKTFIFLSGSGVFMQRT 113
              A  +D  I+   V     FE+   I R     + E+L GS K F++ +G+       
Sbjct: 61  KKGATESDGVIHLGFVHDFKNFEQCCEIDRQATVAMLESLKGSNKPFLYTNGTL------ 114

Query: 114 GGAWSPDSFAEDDPFVPEPLALPRVEAEAIVRAAAEHGLRSMVIRPPV-IWGPGDKGPLA 172
             +  P+  A +   + E   + R   E +  +  + G+ + ++R P  + G GDK  + 
Sbjct: 115 --SLRPNKVANEQDGIDEDSKILRAVTEQVALSYKDKGVSARIVRLPFSVHGKGDKAFVP 172

Query: 173 SVYRSVAVTGAACYVGSGLAAYSNVHSADLAQLFSLGVERGRAGALYHAAAGE-IPYRWI 231
            +       G + YVG G  A++ VH  D A LF L +E+G+ G +YH    + IP++ I
Sbjct: 173 ILMNIAKAAGKSGYVGQGTNAWAAVHRLDTAPLFRLVLEKGKTGQVYHCVGEQGIPFKDI 232

Query: 232 AEAVARDLGVKTRSLTMDEASGVFGPFGALLLSACSRSRD-----PRTRSDLGWQPTQFD 286
           A  +   L V   S+ +D+A   FG         C  +RD       TR +LGWQP Q  
Sbjct: 233 ARVIGEILNVPVASIPVDDAESHFG------FLTCFVTRDGPVSSEGTRKELGWQPQQIG 286

Query: 287 FLSQV 291
            L  +
Sbjct: 287 LLEDI 291


>SPBC2A9.02 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Spo
           Schizosaccharomyces pombe
          Length = 295

 Score =  122 bits (307), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 144/298 (48%), Gaps = 22/298 (7%)

Query: 5   IFIIGASGFVGSMLAKHFLADGQRVSGLARTDAAEAVLRTAGTSVIRG---DLD------ 55
           IF+ GA+GF+GS + +  L  G  V GL R++   A LR AG +   G   DLD      
Sbjct: 3   IFVTGAAGFIGSEIVRQLLEAGHEVVGLVRSEENAAKLRAAGGTPYIGTLEDLDTLKKGV 62

Query: 56  ANVAPVLAAARSADVTIYAAQVAFEREPTIIRTLCEALAGSGKTFIFLSGSGVFMQRTGG 115
           A    V+  A   D +IY  Q A + +  +I  + E L G+ +  I  S + V       
Sbjct: 63  AQCDGVIHTAFVHDFSIY--QEACKLDARVIEAIGEVLRGTERPLITTSVTAVLS----- 115

Query: 116 AWSPDSFAEDDPFVPEPLALPRVEAEAIVRAAAEHGLRSMVIR-PPVIWGPGDKGPLASV 174
             S      +   VP+P  +PR   E      A  G+R+ ++R PP + G GD   +  +
Sbjct: 116 --SNGKLGTEISEVPQP-PIPRQLGEVTTLKFASQGVRASILRLPPTVHGAGDHAFVPML 172

Query: 175 YRSVAVTGAACYVGSGLAAYSNVHSADLAQLFSLGVERGRAGALYHAAAGE-IPYRWIAE 233
                  G + Y+G+G+  +  VH  D A LF L +E+  AG++YHA A E IP + IA 
Sbjct: 173 INVAKNKGVSAYIGNGMNCWPAVHRTDAANLFVLALEKETAGSIYHAVAEEGIPIKEIAG 232

Query: 234 AVARDLGVKTRSLTMDEASGVFGPFGALLLSACSRSRDPRTRSDLGWQPTQFDFLSQV 291
            + + L +   S++ +EA+  FG F +  LS  + +    T+  LGW+PT    ++ +
Sbjct: 233 MIGKRLDIPVISVSSEEATEHFG-FLSSFLSVDNPTSSILTQQRLGWKPTHSTLMTDL 289


>mll2153 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Mlo
           Mesorhizobium loti
          Length = 294

 Score =  110 bits (276), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 138/291 (47%), Gaps = 24/291 (8%)

Query: 5   IFIIGASGFVGSMLAKHFLADGQRVSGLARTDAAEAVLRTAGTSVIRGDLDANVAPVLAA 64
           IF+ GA+GF+GS L    +  G +V G+ R+DA    L  AG  V RG L+ +   + + 
Sbjct: 3   IFLTGATGFIGSALVPELIQAGHQVIGVTRSDAGAEALAAAGAEVHRGTLE-DPTSLRSG 61

Query: 65  ARSADVTIYAA--------QVAFEREPTIIRTLCEALAGSGKTFIFLSGSGVFMQRTGGA 116
           A  AD  I+ A            E++  +I  L +ALAGS +  +  SG G+     G  
Sbjct: 62  AAEADAVIHTAFDHDFSRFAENCEKDKRVIAALGQALAGSDRPLVITSGVGMGSPGHGQL 121

Query: 117 WSPDSFAEDDPFVPEPLALPRVEAEAIVRAAAEHGLRSMVIRPPVIWGPGDKGPLASVYR 176
              D F    P        PR+ +E    A  E G+   V+R P +  P  +G ++ +  
Sbjct: 122 AVEDVFNASHPN-------PRIASELAGNALLEAGINLSVVRLPQVHNPVKQGLISPLIE 174

Query: 177 SVAVTGAACYVGSGLAAYSNVHSADLAQLFSLGVERGRAGALYHAAAGE-IPYRWIAEAV 235
                G + YVG G   YS  H +D A+L+ L VE+ + GA YHA   E +  R IAEA+
Sbjct: 175 IARDKGVSAYVGEGRNRYSAGHLSDAARLYRLAVEKRQPGARYHAVGEEGVEVRAIAEAL 234

Query: 236 ARDLGVKTRSLTMDEAS---GVFGPFGALLLSACSRSRDPRTRSDLGWQPT 283
            R L +   S+  ++A+   G  G F  + L A S      T++ LGW PT
Sbjct: 235 GRGLKLPVVSIAPEQAAQHFGWMGMFAPMDLPASS----ALTQARLGWHPT 281