BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0046.p         (80 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr6294 Non COG                                                        75   4e-14
RSp1573 [S] COG5476 Uncharacterized conserved protein Rso Ralsto...    73   1e-13
mll6676 Non COG                                                        62   4e-10

>mlr6294 Non COG
          Length = 525

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 48/69 (69%)

Query: 9   QLLDLELLRFIGIEPSEQAIIAVKSTVHFRADFAPIASDILICAAPGAFPLDPRQLAWTR 68
           Q LD +LLR +G+EP +Q+++AVKS VHFRADFAPIA +IL   +PGA       L +  
Sbjct: 440 QCLDQDLLRAVGVEPRDQSVVAVKSAVHFRADFAPIAEEILTVESPGAHWCRNDILDYKN 499

Query: 69  LPDWMRKMP 77
           L D +R+MP
Sbjct: 500 LRDGVRRMP 508


>RSp1573 [S] COG5476 Uncharacterized conserved protein Rso Ralstonia
           solanacearum
          Length = 494

 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 46/79 (58%)

Query: 1   VVVVSKPVQLLDLELLRFIGIEPSEQAIIAVKSTVHFRADFAPIASDILICAAPGAFPLD 60
           V V +   Q++D    R +GIEP    I+  KS+VHFRADF PIA  +L+  APG    D
Sbjct: 409 VAVSTGRAQMMDRNQYRMVGIEPERMRILVNKSSVHFRADFEPIAQAVLVAKAPGIALAD 468

Query: 61  PRQLAWTRLPDWMRKMPAA 79
           P +L WTRL   MR  P A
Sbjct: 469 PGELPWTRLAPGMRLRPRA 487


>mll6676 Non COG
          Length = 488

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 2/74 (2%)

Query: 1   VVVVSKPVQLLDLELLRFIGIEPSEQAIIAVKSTVHFRADFAPIASDILICAAPGAFPLD 60
           +V+ S   Q    E +  +G++P+ + I+ VKS+ HFRA F PIA DIL  AAPGA   +
Sbjct: 403 LVINSVRTQTFHPECMTALGLDPATRKIVVVKSSNHFRAGFEPIAKDILYVAAPGALQPN 462

Query: 61  PRQLAWTRL--PDW 72
            R LA+T+L  P W
Sbjct: 463 FRDLAYTKLRQPYW 476