BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0042.p         (195 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1422 Non COG                                                       103   3e-22

>RSc1422 Non COG
          Length = 142

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/139 (49%), Positives = 90/139 (64%), Gaps = 3/139 (2%)

Query: 53  IWFVAAGVAIGVELFTGTFYLLMIAIGLGAGGVAALLGGKLEWQLLLAAAIGFAAIGALR 112
           +WF  A + +  EL TGTFYLLM+AIGL AGG+AAL G     Q +LAA +    I  L 
Sbjct: 7   VWFTLAVLLVIGELMTGTFYLLMVAIGLLAGGLAALAGLGFPVQAVLAALVAVIGIAGLW 66

Query: 113 RSRFGRRHENDAGRDPNVNLDIGQSVSVDHWNDLDGTHTARIRYRGAEWDVELAAGSPVQ 172
           R+RFG     +A R+ NVNLDIG+ + VD W+       AR++YRGAEWDVELA  +P  
Sbjct: 67  RTRFGHAARENAARNRNVNLDIGEMLRVDAWSP---ERRARVQYRGAEWDVELAPPAPAT 123

Query: 173 AGQFIIREVRGSRLIVSHQ 191
            G+F I EVRG+ L+V+ +
Sbjct: 124 GGEFRIVEVRGNVLVVAPK 142