BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0022.p         (97 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC1769 [S] COG3346 Uncharacterized conserved protein Ccr Cauloba...    68   6e-12
BMEI1460 [S] COG3346 Uncharacterized conserved protein Bme Bruce...    59   4e-09

>CC1769 [S] COG3346 Uncharacterized conserved protein Ccr Caulobacter
           vibrioides
          Length = 225

 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 8/80 (10%)

Query: 1   VPAIAVSRKLDHVAPYFIDAEDMHSAASEQQRAANGQAVGGLTVISFPNNHLVYALTWFG 60
           V AIA SR L  VAPYF+DA+   +          G   GGLTV+ FPN+HL+YALTWF 
Sbjct: 149 VAAIAQSRGLGVVAPYFVDADGAPNP--------GGWPRGGLTVVRFPNSHLIYALTWFA 200

Query: 61  LALMTGAAFFWIGRDEKRRR 80
           LAL +  A  ++  D +R R
Sbjct: 201 LALFSAGAAAYVLADARRSR 220


>BMEI1460 [S] COG3346 Uncharacterized conserved protein Bme Brucella
           melitensis
          Length = 249

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 9/72 (12%)

Query: 10  LDHVAPYFIDAEDMHSAASEQQRAANGQAVGGLTVISFPNNHLVYALTWFGLAL-MTGAA 68
           L  V P+F+DA+   +          G  +GG+T+I FPNNHL YA+TW+GLAL + G  
Sbjct: 185 LGRVVPFFVDADSTPNPG--------GLPIGGVTIIDFPNNHLQYAVTWYGLALALIGVV 236

Query: 69  FFWIGRDEKRRR 80
             W+ R  K  R
Sbjct: 237 GTWLWRYRKSGR 248