BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0015.p (453 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMb21486 [GEPR] COG0477 Permeases of the major facilitator super... 508 e-144 CC1774 [GEPR] COG0477 Permeases of the major facilitator superfa... 479 e-135 mll6844 [GEPR] COG0477 Permeases of the major facilitator superf... 472 e-133 AGc231 [GEPR] COG0477 Permeases of the major facilitator superfa... 447 e-125 SMc01869 [GEPR] COG0477 Permeases of the major facilitator super... 271 3e-72 >SMb21486 [GEPR] COG0477 Permeases of the major facilitator superfamily Sme Sinorhizobium meliloti Length = 431 Score = 508 bits (1309), Expect = e-144, Method: Compositional matrix adjust. Identities = 261/426 (61%), Positives = 324/426 (76%), Gaps = 2/426 (0%) Query: 28 NVNNAKSDHPVIAPGDIAIGVVIGRASEYFDFFVYAIASVLVFPTIFFPFE-QRLEGTLY 86 + D PV A G+IAIGVVIGRA+E+FDFFVY IASV+VFP +FFPF RL TLY Sbjct: 4 DARRIHDDTPVSA-GNIAIGVVIGRAAEFFDFFVYGIASVVVFPQLFFPFAPDRLTATLY 62 Query: 87 SFTIFAFAFLARPFGTILFMAIQRKLGREVKLTLALFLLGLSTAGIAFLPTYEHLGFTAI 146 SF IF+ AF+ARP G+++FMAI R GR VKLT+ALFLLG STA IAFLP Y LG +I Sbjct: 63 SFAIFSLAFVARPVGSLVFMAIDRTYGRGVKLTIALFLLGGSTASIAFLPGYATLGAWSI 122 Query: 147 VLLSVLRIGQGLALGGSWDGLPSLLALNVPKNKRGWYAMLGQLGAPVGFIVAGLVFAYLI 206 VLL+V R+GQG ALGG+WDGL SLLALN P++ RGWYAM+ QLGAP+GF++A +FAY + Sbjct: 123 VLLAVFRLGQGFALGGAWDGLASLLALNAPQHHRGWYAMIPQLGAPLGFMLASALFAYFL 182 Query: 207 GNLSSDDFLEWGWRYPFYVAFAINVVALFARLRLVASDEYAQLLKERELEPTGVVDITRT 266 ++S DFL WGWRYPF+VAFAINVVALF RLRLV + E+ LL EL+ V ++ R Sbjct: 183 VSISKADFLAWGWRYPFFVAFAINVVALFTRLRLVMTKEFGTLLDLHELQAAPVTEVLRA 242 Query: 267 QGRNLIIGALAALASYALFHLVSVFPLSWISLYSMRSMSDFLMVQVFGAVLMMVGIVLSG 326 G N+++GA LAS+ALFHLV+VFPLSW+ +Y+ S FLMVQ GAV ++ I+ SG Sbjct: 243 NGGNVLVGAFVPLASFALFHLVTVFPLSWVEIYTDHGASSFLMVQFLGAVCGILAIIASG 302 Query: 327 PIADRFGRRTTLGALAVLIAVLSGFVPTLINGGDTGQDIFILVGFALLGLSYGQAAGAVT 386 IADR GRR LG AVLIA+ S P L+ G TG+D+F++VGF +LGLS+GQAAGAV Sbjct: 303 LIADRIGRRNHLGICAVLIAIFSFVAPMLLQAGATGRDVFVIVGFTILGLSFGQAAGAVA 362 Query: 387 ANFPAKYRYTGAALTSDLAWLVGAGFAPLVALGLSAHFGLAYVSIYLLSGAVCSLAALSV 446 + F YRYTGAALTSDL+WL+GAGFAPLVALGL++ FGLA+ YLLSGA+C++ AL Sbjct: 363 SRFGKAYRYTGAALTSDLSWLIGAGFAPLVALGLTSRFGLAFAGYYLLSGALCTILALVF 422 Query: 447 NRALDI 452 ++ L+I Sbjct: 423 SKKLEI 428 >CC1774 [GEPR] COG0477 Permeases of the major facilitator superfamily Ccr Caulobacter vibrioides Length = 446 Score = 479 bits (1233), Expect = e-135, Method: Compositional matrix adjust. Identities = 242/431 (56%), Positives = 325/431 (75%), Gaps = 1/431 (0%) Query: 24 GGSDNVNNAKSDHPVIAPGDIAIGVVIGRASEYFDFFVYAIASVLVFPTIFFPFEQRLEG 83 G + +D + PG+IA+GVVIGR SE+FDFFVYAIASVLVFP + FPF RL G Sbjct: 12 GLERDARRMHADDKGVRPGEIALGVVIGRTSEFFDFFVYAIASVLVFPQLVFPFVDRLTG 71 Query: 84 TLYSFTIFAFAFLARPFGTILFMAIQRKLGREVKLTLALFLLGLSTAGIAFLPTYEHLGF 143 + +F +FA AF+ARPFG+++F AI ++ GR VKLT+ALFLLG STA I+ LP++ +G Sbjct: 72 VMLAFGLFALAFIARPFGSVIFGAIDQRYGRGVKLTIALFLLGGSTAVISMLPSFAAVGP 131 Query: 144 TAIVLLSVLRIGQGLALGGSWDGLPSLLALNVPKNKRGWYAMLGQLGAPVGFIVAGLVFA 203 AI L+ RIGQGLAL G+WDG+ SLLALN P+NKRGWYAM+ QLGAP GF++A +FA Sbjct: 132 IAIWALAACRIGQGLALAGAWDGMASLLALNAPENKRGWYAMIPQLGAPFGFMLASGLFA 191 Query: 204 YLIGNLSSDDFLEWGWRYPFYVAFAINVVALFARLRLVASDEYAQLLKERELEPTGVVDI 263 Y + L+ DFL+WGWRYPF+ AFAINVVALFARLR+VA++E+ L ++REL PT V + Sbjct: 192 YFVATLAPADFLDWGWRYPFFAAFAINVVALFARLRIVATEEFGALFEKRELRPTRVASL 251 Query: 264 TRTQGRNLIIGALAALASYALFHLVSVFPLSWISLY-SMRSMSDFLMVQVFGAVLMMVGI 322 R +G N++IGA A LA++A+FHLV+VFPLSW+ L+ + +FL +++FGA++ + GI Sbjct: 252 LRAEGGNVLIGAFAPLATFAMFHLVTVFPLSWVVLHGDAQQALNFLRIELFGALVGVGGI 311 Query: 323 VLSGPIADRFGRRTTLGALAVLIAVLSGFVPTLINGGDTGQDIFILVGFALLGLSYGQAA 382 + SG IADR R+ L A+LI S P L++GG TGQ ++++GFA+LGLS+GQAA Sbjct: 312 LASGWIADRITRQNQLALSALLIGAFSLLAPRLLDGGATGQTAYVVIGFAILGLSFGQAA 371 Query: 383 GAVTANFPAKYRYTGAALTSDLAWLVGAGFAPLVALGLSAHFGLAYVSIYLLSGAVCSLA 442 GAV++ F +YRYTGAALTSDL+WL+GAGFAPL ALGL++ +GL + +YL SGA+ +L Sbjct: 372 GAVSSGFSKRYRYTGAALTSDLSWLIGAGFAPLAALGLASLWGLPAIGLYLASGALATLL 431 Query: 443 ALSVNRALDIR 453 AL+++R R Sbjct: 432 ALTIDRTRRRR 442 >mll6844 [GEPR] COG0477 Permeases of the major facilitator superfamily Mlo Mesorhizobium loti Length = 411 Score = 472 bits (1215), Expect = e-133, Method: Compositional matrix adjust. Identities = 238/400 (59%), Positives = 309/400 (77%) Query: 48 VVIGRASEYFDFFVYAIASVLVFPTIFFPFEQRLEGTLYSFTIFAFAFLARPFGTILFMA 107 +++GR SE+FDFFVYAIASV+VFP + FP L GTLYSF IFA AF+ARPFG++LFMA Sbjct: 1 MIVGRTSEFFDFFVYAIASVIVFPKLVFPTHDPLVGTLYSFCIFALAFVARPFGSVLFMA 60 Query: 108 IQRKLGREVKLTLALFLLGLSTAGIAFLPTYEHLGFTAIVLLSVLRIGQGLALGGSWDGL 167 I R GR KLT+ALFLLG ST IAFLP Y +G A+ LL++ RIGQGLALGG+WDGL Sbjct: 61 IDRAYGRGAKLTIALFLLGTSTVAIAFLPAYGDIGAVAVWLLALARIGQGLALGGTWDGL 120 Query: 168 PSLLALNVPKNKRGWYAMLGQLGAPVGFIVAGLVFAYLIGNLSSDDFLEWGWRYPFYVAF 227 PSLLALN P+N+RG+YAM+ QLGAP+G IVA +FA+ + NLS+DDF WGWRYPF+VAF Sbjct: 121 PSLLALNAPQNRRGFYAMIPQLGAPIGLIVASSLFAFFVANLSADDFFSWGWRYPFFVAF 180 Query: 228 AINVVALFARLRLVASDEYAQLLKERELEPTGVVDITRTQGRNLIIGALAALASYALFHL 287 AINVVALFARLR+V + E+++L + +L+PT + D R +G N++IGA A LAS+ALFH+ Sbjct: 181 AINVVALFARLRIVVTPEFSKLYESGDLQPTRIRDTIRAEGHNVVIGAFAPLASFALFHM 240 Query: 288 VSVFPLSWISLYSMRSMSDFLMVQVFGAVLMMVGIVLSGPIADRFGRRTTLGALAVLIAV 347 V+VFPLSW+ L++ + FLM++ A+ + IV SGP+ADR GRR LG A+ IA Sbjct: 241 VTVFPLSWVFLFTNEGPARFLMIEAVSALFGIAAIVASGPLADRVGRRALLGGSAIAIAT 300 Query: 348 LSGFVPTLINGGDTGQDIFILVGFALLGLSYGQAAGAVTANFPAKYRYTGAALTSDLAWL 407 SGF P L++GG G+ +F+++GF LLGLS+GQ++G V ++F +YRYTG+A+TSDLAW+ Sbjct: 301 FSGFAPQLLDGGAVGEALFMVLGFILLGLSFGQSSGVVASSFSRQYRYTGSAITSDLAWM 360 Query: 408 VGAGFAPLVALGLSAHFGLAYVSIYLLSGAVCSLAALSVN 447 GAGFAPL AL L+ +FGL YLLSGA C+L AL ++ Sbjct: 361 FGAGFAPLAALLLAGNFGLIAAGAYLLSGAACTLLALWID 400 >AGc231 [GEPR] COG0477 Permeases of the major facilitator superfamily Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 440 Score = 447 bits (1150), Expect = e-125, Method: Compositional matrix adjust. Identities = 227/435 (52%), Positives = 306/435 (70%), Gaps = 2/435 (0%) Query: 18 SANTPVGGSDNVNNAKSDHPVIAPGDIAIGVVIGRASEYFDFFVYAIASVLVFPTIFFPF 77 +A G + N A + P I I V++ R +E+FDFF+YAIAS LVFP +FF F Sbjct: 5 NAAPSFGQAPEANGAGPTS--VDPDRITIAVILARMTEFFDFFIYAIASALVFPHVFFSF 62 Query: 78 EQRLEGTLYSFTIFAFAFLARPFGTILFMAIQRKLGREVKLTLALFLLGLSTAGIAFLPT 137 L TLYSF +F+ AF+ARP G+++F+ I RK GR VKL ALF L ST I+FLP+ Sbjct: 63 VDPLTATLYSFAVFSLAFIARPIGSLIFLQIDRKFGRAVKLMAALFTLCGSTMAISFLPS 122 Query: 138 YEHLGFTAIVLLSVLRIGQGLALGGSWDGLPSLLALNVPKNKRGWYAMLGQLGAPVGFIV 197 Y+ G A LL+ RIGQGL LGG+WDGL SLLA+N P+ +RGWYAM+ Q+GA +GF + Sbjct: 123 YDEAGMLAPCLLAAFRIGQGLGLGGAWDGLVSLLAMNAPQKQRGWYAMMPQIGAAMGFGL 182 Query: 198 AGLVFAYLIGNLSSDDFLEWGWRYPFYVAFAINVVALFARLRLVASDEYAQLLKERELEP 257 A F + LS+ +FL WGWR+PF+VA A+NV+ALFARLR++ + E+ +L++ ELEP Sbjct: 183 ASAFFIVFVTQLSNAEFLAWGWRFPFFVALALNVLALFARLRMIVTPEFQAMLEQHELEP 242 Query: 258 TGVVDITRTQGRNLIIGALAALASYALFHLVSVFPLSWISLYSMRSMSDFLMVQVFGAVL 317 + + R+Q ++ GA LAS+ALFHLV+VFPLSW+SL + + +SDFL VQ A++ Sbjct: 243 RPMFRMLRSQFPVVLTGAFVPLASFALFHLVTVFPLSWVSLNTSQRVSDFLFVQFVSAII 302 Query: 318 MMVGIVLSGPIADRFGRRTTLGALAVLIAVLSGFVPTLINGGDTGQDIFILVGFALLGLS 377 IV+SG +ADR GRR L A LI + S P L++ GD G+ +F+L+GF+LLGLS Sbjct: 303 CGGMIVVSGILADRIGRRKLLAIAAALIGLFSLVAPVLLSSGDIGRYLFVLIGFSLLGLS 362 Query: 378 YGQAAGAVTANFPAKYRYTGAALTSDLAWLVGAGFAPLVALGLSAHFGLAYVSIYLLSGA 437 +GQA GA+ + F +YRYTGA+LTSD++WL+GAGFAPLVALG S+ FGL V IYL+SGA Sbjct: 363 FGQAGGALASRFSREYRYTGASLTSDISWLIGAGFAPLVALGFSSKFGLFAVGIYLMSGA 422 Query: 438 VCSLAALSVNRALDI 452 VC+L AL +R L++ Sbjct: 423 VCTLVALWFSRTLEM 437 >SMc01869 [GEPR] COG0477 Permeases of the major facilitator superfamily Sme Sinorhizobium meliloti Length = 436 Score = 271 bits (692), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 163/423 (38%), Positives = 243/423 (57%) Query: 30 NNAKSDHPVIAPGDIAIGVVIGRASEYFDFFVYAIASVLVFPTIFFPFEQRLEGTLYSFT 89 + A V +P + ++G E+FDF+VYA A+V++FP +FFP L S Sbjct: 12 DGALHRQAVNSPARVLFASLVGTTIEFFDFYVYATAAVIIFPHLFFPAADPTSAMLQSLA 71 Query: 90 IFAFAFLARPFGTILFMAIQRKLGREVKLTLALFLLGLSTAGIAFLPTYEHLGFTAIVLL 149 F+ AF ARP G ++F ++GR+ L AL +G+ST I LPTY +G A +LL Sbjct: 72 TFSIAFFARPLGAVIFGHFGDRIGRKATLVAALMTMGISTVVIGLLPTYSTIGVVAPLLL 131 Query: 150 SVLRIGQGLALGGSWDGLPSLLALNVPKNKRGWYAMLGQLGAPVGFIVAGLVFAYLIGNL 209 ++ R GQGL LGG W G L N P+ KR WYAM QLGAP+GFI++ F L + Sbjct: 132 ALCRFGQGLGLGGEWGGAVLLATENAPEGKRSWYAMFPQLGAPIGFILSAGTFLILGEVM 191 Query: 210 SSDDFLEWGWRYPFYVAFAINVVALFARLRLVASDEYAQLLKERELEPTGVVDITRTQGR 269 S + FL WGWR PF + + +V L+ RL++ + E+ + + + E V I R+ R Sbjct: 192 SEEAFLAWGWRVPFIASVLLVIVGLYVRLKITETPEFQKAIDKHERVEVPVAAIFRSHKR 251 Query: 270 NLIIGALAALASYALFHLVSVFPLSWISLYSMRSMSDFLMVQVFGAVLMMVGIVLSGPIA 329 +L++G ALA++ LF+L++VF LSW + S FL+VQ+ G V + I +SG ++ Sbjct: 252 SLVLGTFVALATFVLFYLMTVFSLSWGTTKLGYSREQFLLVQMTGVVFFGLMIPVSGILS 311 Query: 330 DRFGRRTTLGALAVLIAVLSGFVPTLINGGDTGQDIFILVGFALLGLSYGQAAGAVTANF 389 DRFGRR L + I V F+ L++ G G +F +VG L+GL+YG A+ A F Sbjct: 312 DRFGRRLVLVLTTIGIGVFGLFMAPLLSSGLGGAFVFSIVGLGLMGLTYGPIGAALAAPF 371 Query: 390 PAKYRYTGAALTSDLAWLVGAGFAPLVALGLSAHFGLAYVSIYLLSGAVCSLAALSVNRA 449 P RYTGA++T +LA + GA AP +A L+ ++ L +V YLL+ A +L L ++ Sbjct: 372 PTAVRYTGASMTFNLAGIFGASLAPYIATWLATNYSLGHVGYYLLAAASITLVCLLLSNE 431 Query: 450 LDI 452 ++ Sbjct: 432 EEV 434