BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0003.p (243 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3447 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 296 3e-80 BS_ssuB [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 205 9e-53 PA0184 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 201 1e-51 MK0603 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 196 5e-50 MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 182 6e-46 >PA3447 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Pae Pseudomonas aeruginosa Length = 249 Score = 296 bits (757), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 155/249 (62%), Positives = 184/249 (73%), Gaps = 6/249 (2%) Query: 1 MSTILDIRVRRKSFGDETILQGVELALAEREVVALLGPSGCGKSTLLRIAAGLDKDFLGS 60 MS +LD+ RK++GD +L+GV L+LA EVV+LLGPSGCGKSTLLRIAAGLD DF G+ Sbjct: 1 MSGLLDLLEIRKAYGDTRVLEGVALSLAPGEVVSLLGPSGCGKSTLLRIAAGLDDDFQGT 60 Query: 61 VTRATEL------TGQRNGGVAFVFQEPRLMPWLTVAQNVGFADGDRADRAWISQLLEEV 114 V R L R+GG+ VFQEPRL+PWLTVAQNVGFADG D W+ +LL +V Sbjct: 61 VERNPILGFGPDGENGRSGGIGVVFQEPRLLPWLTVAQNVGFADGWLEDEHWVERLLADV 120 Query: 115 GLAGWEDSLPKQLSGGMAQRVAIARGLYSRPRVLLLDEPFSAVDAFTRMKLQDLLLGLAQ 174 GLAG LPKQLSGGMAQR AIARGLY RP+VLLLDEPFSAVDAFTRM+LQDLL + Q Sbjct: 121 GLAGCGGLLPKQLSGGMAQRAAIARGLYGRPQVLLLDEPFSAVDAFTRMRLQDLLQDVVQ 180 Query: 175 QHQISLLLVTHDIDESLYLGDRVLVMGSRPGNIRNTILVGLPQPRQRADQRLAVFKAHAL 234 ++IS+LLVTHD+DE+ YL DRVL+MG RPG+IR V L +PR R LA + AL Sbjct: 181 NYEISVLLVTHDLDEAFYLADRVLLMGGRPGHIRREFHVPLARPRDRRAVELAYLRGEAL 240 Query: 235 SELHEAHAF 243 +E+ AH Sbjct: 241 TEMQRAHVL 249 >BS_ssuB [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Bsu Bacillus subtilis Length = 274 Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 110/245 (44%), Positives = 156/245 (63%), Gaps = 14/245 (5%) Query: 7 IRVRRKSFGDE----TILQGVELALAEREVVALLGPSGCGKSTLLRIAAGLDKDFLGSVT 62 I ++ K+F E T+L+ +EL++A E + L+GPSGCGKSTLL+I AGLD ++ GSV Sbjct: 24 ISIKEKAFVQEGRKNTVLENIELSIAPGEFLTLIGPSGCGKSTLLKIIAGLDSEYDGSVE 83 Query: 63 ---RATELTGQRNGGVAFVFQEPRLMPWLTVAQNVGFADGDRAD---RAWISQLLEEVGL 116 R+ G + G F+FQE RL PWLTV QN+ AD + D + + +L+E V L Sbjct: 84 INGRSVTAPGIQQG---FIFQEHRLFPWLTVEQNIA-ADLNLKDPKVKQKVDELIEIVRL 139 Query: 117 AGWEDSLPKQLSGGMAQRVAIARGLYSRPRVLLLDEPFSAVDAFTRMKLQDLLLGLAQQH 176 G E + P++LSGGM+QRVAI R L P VLLLDEPF A+DAFTR LQD+LL + ++ Sbjct: 140 KGSEKAYPRELSGGMSQRVAITRALLREPEVLLLDEPFGALDAFTRKHLQDVLLDIWRKK 199 Query: 177 QISLLLVTHDIDESLYLGDRVLVMGSRPGNIRNTILVGLPQPRQRADQRLAVFKAHALSE 236 + +++LVTHDIDES+YLG+ + ++ ++PG I + + L PR R + LSE Sbjct: 200 KTTMILVTHDIDESVYLGNELAILKAKPGKIHKLMPIHLAYPRNRTTPDFQAIRQRVLSE 259 Query: 237 LHEAH 241 + Sbjct: 260 FEKTE 264 >PA0184 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Pae Pseudomonas aeruginosa Length = 279 Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 112/229 (48%), Positives = 147/229 (64%), Gaps = 9/229 (3%) Query: 2 STILDIRVRRKSFGDE----TILQGVELALAEREVVALLGPSGCGKSTLLRIAAGLDKDF 57 + ++ R RK F + +Q +L + E E +A++G SGCGKSTLLR+ GLD+D+ Sbjct: 11 TPLVSFRQVRKHFAVDGRRLEAIQQFDLEIGEGEFIAIVGASGCGKSTLLRLLIGLDRDY 70 Query: 58 LGSVTRATELTGQRNGGVAFVFQEPRLMPWLTVAQNVGF-----ADGDRADRAWISQLLE 112 G + G VFQE RL PWLTV QNV A G+ A I + + Sbjct: 71 DGEIRVDGRPIAGIGGERGIVFQEHRLFPWLTVQQNVALGLVNEALGETDKAARIDEYIR 130 Query: 113 EVGLAGWEDSLPKQLSGGMAQRVAIARGLYSRPRVLLLDEPFSAVDAFTRMKLQDLLLGL 172 VGL G+E + P QLSGGMAQRVAIARGL + PR+LLLDEPFSA+DA TR +LQ+ LL + Sbjct: 131 LVGLHGFERAYPHQLSGGMAQRVAIARGLVASPRLLLLDEPFSALDALTRQQLQEELLAI 190 Query: 173 AQQHQISLLLVTHDIDESLYLGDRVLVMGSRPGNIRNTILVGLPQPRQR 221 ++ +I+ LLVTHD++E+LYL DRV+VM RPG IR + VGL PR+R Sbjct: 191 RRRTRITTLLVTHDVEEALYLADRVVVMEPRPGRIRRVVEVGLAHPRER 239 >MK0603 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mka Methanopyrus kandleri AV19 Length = 246 Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 106/241 (43%), Positives = 149/241 (61%), Gaps = 6/241 (2%) Query: 1 MSTILDIRVRRKSFGDETILQGVELALAEREVVALLGPSGCGKSTLLRIAAGLDKDFLGS 60 M+ IL + KS+ D +L G+ ++E E A++GPSGCGK+TLL+I AGL+ G Sbjct: 1 MAVILKVEDLHKSYDDLKVLDGITFEVSEGEFFAIVGPSGCGKTTLLKIIAGLEDYDAGR 60 Query: 61 VTRATELTGQRNGGVAFVFQEPRLMPWLTVAQNVGFA------DGDRADRAWISQLLEEV 114 V E + A VFQE + PW TV +NV FA D + A+R L Sbjct: 61 VLVDGEEVREPGPDRALVFQEYAIFPWKTVLENVMFAPLMQGKDPEEAERIARECLKVVP 120 Query: 115 GLAGWEDSLPKQLSGGMAQRVAIARGLYSRPRVLLLDEPFSAVDAFTRMKLQDLLLGLAQ 174 GL G+ED+ PKQLSGGM QRVAIAR L + PR+LL+DEPF+AVDA TR K+Q+ LL + + Sbjct: 121 GLEGFEDAYPKQLSGGMKQRVAIARALAAEPRILLMDEPFAAVDAQTRNKMQEELLKIWE 180 Query: 175 QHQISLLLVTHDIDESLYLGDRVLVMGSRPGNIRNTILVGLPQPRQRADQRLAVFKAHAL 234 + ++LLVTH+++E+++L DRV+V+ RP I + + + LP+PR R D +A L Sbjct: 181 RTGQTILLVTHNVEEAVFLADRVMVLSPRPAEIVDIVEIDLPRPRDRTDPEFVELRARIL 240 Query: 235 S 235 Sbjct: 241 D 241 >MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mac Methanosarcina acetivorans str.C2A Length = 268 Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 99/226 (43%), Positives = 136/226 (60%), Gaps = 7/226 (3%) Query: 20 LQGVELALAEREVVALLGPSGCGKSTLLRIAAGLDKDFLGSVT-RATELTGQRNGGVAFV 78 L + + + E + LLGPSGCGK+TLLRIAAGL+ G +T +TG + V Sbjct: 39 LHNISFDVQDGEFICLLGPSGCGKTTLLRIAAGLETLTSGEITLNGVPITGP-DPKRGMV 97 Query: 79 FQEPRLMPWLTVAQNVGFA---DGDRAD--RAWISQLLEEVGLAGWEDSLPKQLSGGMAQ 133 FQ+ L PW TV N+ F G + R + + LE VGL +++S P +LSGGM Q Sbjct: 98 FQQYSLFPWRTVIDNITFGLEMQGIKKSEARKQVEKYLELVGLGQFKNSYPHELSGGMQQ 157 Query: 134 RVAIARGLYSRPRVLLLDEPFSAVDAFTRMKLQDLLLGLAQQHQISLLLVTHDIDESLYL 193 R AIAR L + P VLL+DEPF A+DA TR LQD LL + +Q ++ L VTH +DE+++L Sbjct: 158 RAAIARALANEPEVLLMDEPFGALDAQTRNVLQDELLKIWEQKHVTFLFVTHSVDEAVFL 217 Query: 194 GDRVLVMGSRPGNIRNTILVGLPQPRQRADQRLAVFKAHALSELHE 239 DR++VM SRPG ++ + V LP+PR R + + H L L E Sbjct: 218 SDRIVVMTSRPGRVKEIVSVELPRPRSRTSPEVNRLRDHVLKLLEE 263