BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0174.p
         (298 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313939|ref|YP_003778031.1| alpha-ketoglutarate-dependent t...   501   e-143

>gi|300313939|ref|YP_003778031.1| alpha-ketoglutarate-dependent
           taurine dioxygenase oxidoreductase [Herbaspirillum
           seropedicae SmR1]
          Length = 324

 Score =  501 bits (1290), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 245/295 (83%), Positives = 261/295 (88%), Gaps = 1/295 (0%)

Query: 3   SASALQTPSAAAAQDFTIRAFGGPLGAEITGLDLNLPVSDRELAEIRAALVEHNVVVFRD 62
           SA+ L+ P     Q+F I  F  PLGAEI GLDLN PVS  ELA IR ALVEH VVVFRD
Sbjct: 30  SAATLERPQDIH-QEFEIHRFDAPLGAEIVGLDLNKPVSASELARIRKALVEHGVVVFRD 88

Query: 63  QRITPDQHVAFSRRFGPLQVHVLNRFHLENYPEILIVSNVLEDGKPIGLVDAGADWHSDL 122
           QRITP QHV FSRRFGPLQVHVLNRFHL  +PEILIVSNV+E+GKPIGLVDAGADWHSDL
Sbjct: 89  QRITPQQHVDFSRRFGPLQVHVLNRFHLAGHPEILIVSNVVENGKPIGLVDAGADWHSDL 148

Query: 123 SYMPKPSLGALLHSQELPAEQGDTLFANTANAYDTLPAEIKKLLEGKRAVHSYVYRYERL 182
           SYMPKPSLGALLHSQELPAE+GDTL+ANTA A+D+LPA +K LLEGKRAVHSYVYRYERL
Sbjct: 149 SYMPKPSLGALLHSQELPAERGDTLYANTAAAWDSLPAALKTLLEGKRAVHSYVYRYERL 208

Query: 183 RKLSPWRQELTQKQIDEVPPVEHPVITTHPESGRKILFVSEGFTSHIVGIPRDESDELLK 242
           RKLSPWR  LTQ+QIDEVPPVEHPV+ THPESGRKILFVSEGFTSHI+GIPRDESD LLK
Sbjct: 209 RKLSPWRAPLTQQQIDEVPPVEHPVVITHPESGRKILFVSEGFTSHIIGIPRDESDALLK 268

Query: 243 TLHAHITRPENVYRHQWQPHDMVFWDNRSTQHYAAITPQHLRRTLYRTTVEGDVP 297
            LH HITRPENVY H+WQ HD+VFWDNRSTQHYAAITPQHLRRTLYRTTVEGDVP
Sbjct: 269 ELHTHITRPENVYTHRWQAHDLVFWDNRSTQHYAAITPQHLRRTLYRTTVEGDVP 323


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.135    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 983,089
Number of extensions: 43676
Number of successful extensions: 112
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 112
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 213
Effective length of database: 1,217,395
Effective search space: 259305135
Effective search space used: 259305135
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)