BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0011.p
         (255 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311855|ref|YP_003775947.1| sphingosine kinase/eukaryotic d...   335   2e-93

>gi|300311855|ref|YP_003775947.1| sphingosine kinase/eukaryotic
           diacylglycerol kinase [Herbaspirillum seropedicae SmR1]
          Length = 339

 Score =  335 bits (860), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 168/230 (73%), Positives = 186/230 (80%), Gaps = 15/230 (6%)

Query: 6   KAAFGVLPLGTLNHFAKDLNIPLALDDAIRNIVEGRRLAIDTGEVNGVLFINNSSLGLYP 65
           ++A GVLPLGTLNHFAKDLNIPL L+ AI NI  GRRL +D+ EVNGV FINNSSLGLYP
Sbjct: 100 QSALGVLPLGTLNHFAKDLNIPLTLEGAIANIATGRRLRVDSAEVNGVAFINNSSLGLYP 159

Query: 66  DIVRDREKQQNRLGRGKWLAFCWAAMGALRRYPFLDVRLDVLMGTKDGGNAESHHRRTPF 125
           DIVR+REKQQ RLGRGKWLAF WAAMGALRRYPFL VRL +        + + H RRTPF
Sbjct: 160 DIVREREKQQARLGRGKWLAFTWAAMGALRRYPFLRVRLSI--------DGQEHWRRTPF 211

Query: 126 VFIGNNEYLMDGLNIGKRNSLSEGKLSLYVCHRTGRLGLVRLALHALFGRLRQARDFDML 185
           VFIGNN YLM GL+IGKR+SL+EG LSLYVCH TGR GL+RLALHALFGRLRQA DFDML
Sbjct: 212 VFIGNNPYLMSGLDIGKRSSLTEGCLSLYVCHHTGRWGLLRLALHALFGRLRQAHDFDML 271

Query: 186 SAAEIEIDTRHRHGQHRIKRLRVATDGEVTIMQTPLVYRIRPASLTVIVP 235
           +A +I I+T  R       R+RVATDGEV +MQTPL YRIRPASL VIVP
Sbjct: 272 TATDIHIETHKR-------RMRVATDGEVQLMQTPLSYRIRPASLEVIVP 314


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.323    0.140    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 838,934
Number of extensions: 35572
Number of successful extensions: 72
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 70
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 1,619,870
Length adjustment: 83
Effective length of query: 172
Effective length of database: 1,226,865
Effective search space: 211020780
Effective search space used: 211020780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 129 (54.3 bits)