BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0394.p
         (396 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300314035|ref|YP_003778127.1| transmembrane patatin-like phos...   571   e-164
gi|300312580|ref|YP_003776672.1| FabD/lysophospholipase-like est...    90   3e-19

>gi|300314035|ref|YP_003778127.1| transmembrane patatin-like
           phospholipase [Herbaspirillum seropedicae SmR1]
          Length = 395

 Score =  571 bits (1471), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 271/388 (69%), Positives = 321/388 (82%), Gaps = 2/388 (0%)

Query: 1   MRRKPDASSPASTRSSSPRSSSSPKPRIALVLQGGGALGAYQAGVYQAMHEHDLTPDWVV 60
           MR+ P+ + P+  R ++  +  + KPR+ALVLQGGGALGAYQAGVYQA+HEHD TPDWVV
Sbjct: 1   MRKAPEQTPPSGRRKAAA-APVAEKPRVALVLQGGGALGAYQAGVYQALHEHDFTPDWVV 59

Query: 61  GTSIGAINAAIIAGNRREDRIPRLRAFWESVSHDDAIDMRAVPDATRQLMTWATTMDTIV 120
           GTSIGAINAA+IAGN RE RI RLR FWE+V+H D +D+R VPD  R   T  TTMDT +
Sbjct: 60  GTSIGAINAALIAGNPRETRIERLREFWETVAHPDLLDLRTVPDTLRPWATRLTTMDTFL 119

Query: 121 RGVPGFFTPRPFNPFAIGLPVPPEEASFYNTEELRTTLNKYVDFDYLNDKTEGIRLTVSA 180
           RG PGFF PRP N FA+GLPVPPEEASFY+T EL  TL++ VDFDYLN ++ GIR+TVSA
Sbjct: 120 RGTPGFFRPRPLNAFALGLPVPPEEASFYSTAELEQTLSRLVDFDYLNGQS-GIRMTVSA 178

Query: 181 VKVTCGSLVKFDSSLHTLGAEHVMASGALPPGFPPVRVDGDLYWDGGLYSNTPLEAVLSD 240
           VKV+CG+LV FDS    LG +HV+ASGALPPGF PVRV+G+LYWDGGLYSNTPLEAVL+D
Sbjct: 179 VKVSCGTLVNFDSREQALGPQHVLASGALPPGFAPVRVEGELYWDGGLYSNTPLEAVLND 238

Query: 241 EPRQDTLCMMVDLWHADGPEPRTYEEVQTREKDVTFASRSQRHIDAYLKQHQLRKMAREL 300
            PR + +C+MVDLWHADGPEPRT EEV TREKDVTFASRSQRHIDAYL+Q++LR+ A +L
Sbjct: 239 TPRTNLVCLMVDLWHADGPEPRTLEEVVTREKDVTFASRSQRHIDAYLQQYRLRRAAHDL 298

Query: 301 YERMPADLRKPSDRKQLAELGADTTIHIVRLPYAGRDWNMASKDVNFSRGSIEWRWQQGY 360
           Y+R+P +L    DR+ +AEL ADTTIHIVRL YAGRDWNMASKDVNF+RGS+ WRW+QGY
Sbjct: 299 YQRLPRELLTQQDRQMMAELDADTTIHIVRLAYAGRDWNMASKDVNFARGSVRWRWEQGY 358

Query: 361 QDALRGIEVSQGCPFKVSDTGVVVHELP 388
           QDALRGI +SQ   F  S+ G+VVH+LP
Sbjct: 359 QDALRGIALSQEDSFGQSEAGIVVHDLP 386


>gi|300312580|ref|YP_003776672.1| FabD/lysophospholipase-like
           esterase [Herbaspirillum seropedicae SmR1]
          Length = 338

 Score = 90.1 bits (222), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 124/260 (47%), Gaps = 31/260 (11%)

Query: 28  IALVLQGGGALGAYQAGVYQAMHEHD-LTPDWVVGTSIGAINAAIIAG----NRREDRIP 82
           I+L LQGGG+ GA+  GV   + E   L  + + G S GA+NA ++A     + RE    
Sbjct: 6   ISLALQGGGSHGAFTWGVLDRLLEDGRLGFEGISGASAGAMNAVVLAQGYVQDGREGARA 65

Query: 83  RLRAFWESVSHD---DAIDMRAVP-DATRQLMTWATTMDTIVRGVPGFFTPRPFNPFAIG 138
            L  FW ++S     D I+    P  A    M     +  + R    FF+P   NP  I 
Sbjct: 66  ALERFWTALSTGAPLDYINAEGAPVIANPTPMPGMQALLAMTR----FFSPTQLNPLDI- 120

Query: 139 LPVPPEEASFYNTEELRTTLNKYVDFDYLNDKTEGIRLTVSAVKVTCGSLVKFDSSLHTL 198
                          LR  L + VDFD L  + E ++L ++A +V+ G+L  F ++   L
Sbjct: 121 -------------NPLRDILLEQVDFDRLRRQRE-LKLFIAATQVSTGTLKIFRNA--DL 164

Query: 199 GAEHVMASGALPPGFPPVRVDGDLYWDGGLYSNTPLEAVLSDEPRQDTLCMMVDLWHADG 258
             E ++AS  LP    P+ ++G+ YWDGGL +N P+  +L     +D + +++      G
Sbjct: 165 SVEALLASACLPSLHRPIEIEGEAYWDGGLTANPPIFPLLHACAARDVMVVLLHPSRRAG 224

Query: 259 PEPRTYEEVQTREKDVTFAS 278
             P +  ++  R  +++F+S
Sbjct: 225 T-PTSTHDIGQRLSEISFSS 243


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.134    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,153,854
Number of extensions: 47950
Number of successful extensions: 125
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 124
Number of HSP's successfully gapped: 2
Length of query: 396
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 309
Effective length of database: 1,207,925
Effective search space: 373248825
Effective search space used: 373248825
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 131 (55.1 bits)