BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0023.p (713 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300309610|ref|YP_003773702.1| cation/multidrug efflux protein... 512 e-146 gi|300313716|ref|YP_003777808.1| cobalt-zinc-cadmium resistance ... 145 1e-35 gi|300309819|ref|YP_003773911.1| acriflavin resistance transmemb... 133 4e-32 gi|300310690|ref|YP_003774782.1| cation/multidrug efflux pump pr... 124 4e-29 gi|300313900|ref|YP_003777992.1| cation/multidrug efflux pump pr... 120 5e-28 >gi|300309610|ref|YP_003773702.1| cation/multidrug efflux protein [Herbaspirillum seropedicae SmR1] Length = 1047 Score = 512 bits (1318), Expect = e-146, Method: Compositional matrix adjust. Identities = 294/714 (41%), Positives = 445/714 (62%), Gaps = 19/714 (2%) Query: 1 MSLTKVSDQALAIEAAIDEFMIKFVMALAVVIIVSLVTLGFRVGVVVAAAVPLTLSAVFV 60 ++LT VS A+E ++D+F+ A+A+V++VSLV+LG R G+VV ++P+ L+ + Sbjct: 321 LTLTAVSSMPHAVEKSVDDFLEAVAEAVAIVLVVSLVSLGIRTGMVVVISIPIVLAVTSL 380 Query: 61 IMLATGRDFDRITLGALILSLGLLVDDAIIAIEMMVVKMEEGMDRISAATYAWGATAAPM 120 M +++LG L+L+LGLLVDDAIIA+EMM VK+E+G +R AA +A+ +TA PM Sbjct: 381 FMYLFDIGLHKVSLGTLVLALGLLVDDAIIAVEMMAVKLEQGWNRRRAAAFAYTSTAFPM 440 Query: 121 ASGTLVTIIGFLPVGFARSTAGEYAGNIFWVVAFSLITSWFVAVLFIPYLGVKMLPNIP- 179 +GTLVT+ GFLP+ A+S GEY +IF V A +L+ SW AV+ IP LG ML P Sbjct: 441 LTGTLVTVAGFLPIALAKSGTGEYTRSIFEVSAIALLLSWLAAVVLIPLLGYHMLKEKPG 500 Query: 180 ----------VHAGGQDA-----IYATRNYQRFRALVRWCVDKKWITAAITIGVFAAAIF 224 HAG + IY TR Y R V WCV + T +F ++ Sbjct: 501 ALTDEQIAANPHAGHDEEDHDHPIYQTRIYTWLRRSVAWCVAFRGRVVIATTVLFIGSLA 560 Query: 225 GMGFVQKQFFPNSERPELTIEVNLPPGSAFSATDATVKKIEEALHKEPEAKIVSSYIGQG 284 V +QFFP+S+RPEL I+++LP ++F AT ++E L P+ S++G G Sbjct: 561 AFALVPQQFFPSSDRPELLIDLHLPERASFEATQREAVRMEALLKDRPQIDHYVSFVGVG 620 Query: 285 APRFFLSVNPELPNPAFAQLIVLTDNAKDRDALKAKFSKMIADGKFANARVRVSQFVFGP 344 APRF+L ++ +L +P FAQ +V + +DR+AL + + +F+ R R+++ GP Sbjct: 621 APRFYLPLDQQLASPNFAQFVVTAKSVEDREALARALEEPLRR-QFSGVRTRLTRLENGP 679 Query: 345 PVPFPVLFRIVGPDLNTVRDIAFKVRDVVQSNPDTRDVHLDWGDRTQ-TLRLELDQERLR 403 PV FPV FRI G + VR IA +V ++ ++ DW + Q ++ E+DQ+R Sbjct: 680 PVGFPVQFRISGEQIPKVRAIAEQVAAEMRKESRATNIQFDWDEPAQRSVSFEIDQKRAA 739 Query: 404 QVGLNPRDAALQLQAILNGASTTQVRDGLRIVDVMVRGVKRDRTSLAEIGNLTLTTQDGV 463 Q+GL + + L L+G + TQ R+ +++ V +R + +R A + L++ T +G Sbjct: 740 QLGLTSQQISNFLAMQLSGYTITQYRERDKLISVDLRAPRSERVDPARLATLSMPTANG- 798 Query: 464 AVPLSQVSKLSSNVEDAVLKRNNRELYIAVQGDVRDGMQPPDVTHAILPKLDAIKAALPA 523 VPL+ + + ++ +E V+ NR+ I V DVR G+Q DVT+ + KL+A++A LP Sbjct: 799 PVPLATLGQFNNTLEYGVIWERNRQPTITVLADVRPGVQGIDVTNDVNQKLNALRAELPV 858 Query: 524 GYHIDTGGSVEESAKADVALAAMFPLMIILMLAVIMFQVRSFATMWMVFATAPLGLVGAV 583 GY ID GG VEE+AKA +++A PLM+I +L ++M Q++SF MV TAPLGL+G V Sbjct: 859 GYRIDVGGPVEENAKAQSSISAQMPLMVIAVLLLLMVQLQSFGRTMMVVMTAPLGLIGVV 918 Query: 584 PTLLIFHQPFGFNAILGLIGLAGILIRNTLILVDQIRSDLLSGMTPYEAVIESTVRRARP 643 LL+F QPFGF A+LG I + GI++RN++ILVDQI D+ +G ++A++ +TVRR RP Sbjct: 919 GALLLFGQPFGFVAMLGTIAMLGIIMRNSVILVDQIEQDIAAGRGRFDAIVGATVRRFRP 978 Query: 644 VILTAVAAMLAFIPLTHSSFWGPLAYVLIGGVGVGTVLTLLFLPALYAIWFKVK 697 + LTA AA+LA IPL S+F+GP+A L+GG+ + T+LTL +LPALYA+ ++VK Sbjct: 979 ITLTAAAAVLALIPLLRSNFFGPMATALMGGITIATILTLFYLPALYALCYRVK 1032 >gi|300313716|ref|YP_003777808.1| cobalt-zinc-cadmium resistance cation efflux system transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 1073 Score = 145 bits (366), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 169/713 (23%), Positives = 316/713 (44%), Gaps = 65/713 (9%) Query: 6 VSDQALAIEAAIDEFMIKFVMALAVVIIVSLVTLG-FRVGVVVAAAVPLTLSAVFVIMLA 64 V D+ + ++ AI V +V+ V V LG R ++ A +PL + F M++ Sbjct: 329 VYDRTVLVDKAIATVKKNLVEGALLVVAVLFVFLGNIRAAIITAMVIPLAMLFTFTGMVS 388 Query: 65 TGRDFDRITLGALILSLGLLVDDAIIAIEMMVVKMEEGM----------DRISAATYAWG 114 + ++LGAL G+++D A++ +E V ++ +R A Sbjct: 389 NKVSANLLSLGAL--DFGIIIDGAVVIVENCVRRLAHAQAHHGRTLTRSERFHEVFAAAK 446 Query: 115 ATAAPMASGTLVTIIGFLPVGFARSTAGEYAGNIFWVVAFSLITSWFVAVLFIP-----Y 169 P+ G L+ +I +LP+ G+ + + V +LI + ++V FIP + Sbjct: 447 EARRPLIFGQLIIMIVYLPMFALTGVEGKMFTPMAFTVVAALIGAMILSVTFIPAAIALF 506 Query: 170 LGVKMLPNIPVHAGGQDAIYATRNYQRFRALVRWCVDKKWITAAITIGVFAAAIFGMGFV 229 +G K+ + ++A R Y+ +++ ++ K + + A I G V Sbjct: 507 IGEKVAEKENILM-----LWAKRLYE---PMLKTIMENK----PVVLTFAGALILVCGVV 554 Query: 230 QK----QFFPNSERPELTIEVNLPPGSAFSATDATVKKIEEALHKE-PEAKIVSSYIGQG 284 +F P+ ++ I+ PG++ S + K+IE+ L ++ PE + V + G Sbjct: 555 ASRLGSEFVPSLNEGDMAIQALRIPGTSLSQSLEMQKQIEKTLKQKFPEVERVFARTGTA 614 Query: 285 APRFFLSVNPELPNPAFAQLIVLTDN-----AKDRD----ALKAKFSKMIADG-KFANA- 333 ++ +P PN + +++ K R+ A++ + +K+ + +F+ Sbjct: 615 E----VASDPMPPNISDGYIMLKPQEQWPEPKKSREELLEAIQDEVAKIPGNSYEFSQPI 670 Query: 334 RVRVSQFVFGPPVPFPVLFRIVGPDLNTVRDIAFKVRDVVQSNPDTRDVHLDWGDRTQTL 393 ++R ++ + G V V ++ G D+ + D A K+ V++ P +V ++ L Sbjct: 671 QLRFNELISG--VRSDVAVKVFGDDMKVLNDTASKISAVLEKIPGATEVKIEQTTGLPML 728 Query: 394 RLELDQERLRQVGLNPRDAALQLQAILNGASTTQVRDGLRIVDVMVRGVKRDRTSLAEIG 453 +E+D+E+ + GLN D + + G + G R ++VR + RT L I Sbjct: 729 TVEIDREKTARYGLNVSDIQDTVATAIGGKEAGTMFQGDRRFGIVVRLPDQARTDLEAIR 788 Query: 454 NL--TLTTQDGVA----VPLSQVSKLSSNVEDAVLKRNNRELYIAVQGDVRDGMQPPDVT 507 L L Q+G VPL +V+ L+ + R + + I V +VR V Sbjct: 789 RLPIALPPQEGATRVSYVPLGEVASLTIAPGPNQISREDGKRRIVVSANVRGRDLGGFVA 848 Query: 508 HAILPKLDAIKAALPAGYHIDTGGSVEESAKADVALAAMFPLMIILMLAVIMFQVRSFAT 567 A A+K +PAGY GG E A L + P+ ++++ ++ + Sbjct: 849 EAERQLQSAVK--VPAGYWTTWGGQFENLQSATQRLQIVIPVALLMVFVLLFAMFSNVKD 906 Query: 568 MWMVFATAPLGLVGAVPTLLIFHQPFGFNAILGLIGLAGILIRNTLILVDQIRSDLLSGM 627 +VF P L G + L + P +A +G I L+G+ + N L+++ IRS G Sbjct: 907 GLLVFTGIPFALTGGILALAMRGIPMSISAAVGFIALSGVAVLNGLVMISFIRSLREEGR 966 Query: 628 TPYEAVIESTVRRARPVILTAVAAMLAFIPLTHSSFWG-----PLAYVLIGGV 675 T A+ E + R RPV++TA+ A L F+P+ ++ G PLA V+IGG+ Sbjct: 967 TLDAAIHEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGI 1019 >gi|300309819|ref|YP_003773911.1| acriflavin resistance transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 1048 Score = 133 bits (335), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 176/758 (23%), Positives = 324/758 (42%), Gaps = 96/758 (12%) Query: 8 DQALAIEAAIDEFMIKFVMALAVVIIVSLVTL-GFRVGVVVAAAVPLTLSAVFVIMLATG 66 D + ++ +I+E + + A+ +V +V + L R ++ VP+ L F +L G Sbjct: 328 DTSKFVKISIEEVVKTLIEAIVLVFLVMFLFLQNIRYTIIPTIVVPVALLGTFATLLLFG 387 Query: 67 RDFDRITLGALILSLGLLVDDAIIAIEMMVVKM-EEGMDRISAATYAWGATAAPMASGTL 125 + +T+ ++L++G+LVDDAI+ +E + M EEG+ A A G + + TL Sbjct: 388 FSINVLTMFGMVLAIGILVDDAIVVVENVERIMSEEGLSPADATRKAMGQISGALIGITL 447 Query: 126 VTIIGFLPVGFARSTAGEYAGNIFWVVAFSLITSWFVAVL----FIPYLGVKMLPNIPVH 181 V I F+P+ F G G I+ + S++ S +VL P L +L PV Sbjct: 448 VLIAVFIPMAFF----GGAVGAIYRQFSLSMVASMVFSVLMAFTLTPALCATILK--PVE 501 Query: 182 AGGQDAIYATRNYQRFRALVRWCVDKKWITAAITIGVFAA----------------AIFG 225 G ++ + W K TA+ G+ A G Sbjct: 502 KG---------HHHEKKGFFGWFNRKFNSTASGYQGIIGGMLNKAGRYMIVYVLIVACVG 552 Query: 226 MGFVQ--KQFFPNSERPELTIEVNLPPGSAFSATDATVKKIEEALHKEPEAKIVSSYIGQ 283 + +V+ F PN ++ + V LPPG++ S T A VK+IEE K+P + + +G Sbjct: 553 LLYVRLPASFLPNEDQGYIITNVQLPPGASTSRTTAVVKQIEEYYLKDPAVEHAIAVLG- 611 Query: 284 GAPRFFLSVNPELPNPAFAQLIVLTDNAKDRDALKAKFSKMIADGKFANARVRVSQFVFG 343 + S N + F L + RD K++ + IA GK A ++ + Sbjct: 612 ----YSFSGNGQNAALVFTPL----KDWSQRD--KSQSADAIA-GKAFGAFSQIKDAIVF 660 Query: 344 PPVPFPVLFRIVGPDLNTVRDIAFKVRD--------VVQSNPDTRDVHLDWGDRTQTL-- 393 P P P+ P+L F+++D +VQ+ R+ L +++ L Sbjct: 661 PLNPPPI------PELGNATGFTFRLQDRAGLGHTALVQA----RNQILGMASQSKVLAG 710 Query: 394 ------------RLELDQERLRQVGLNPRDAALQLQAILNGASTTQVRDGLRIVDVMVRG 441 +L++D+++ +G+ L L + + R V+V+ Sbjct: 711 VRPEGLEDAPQLQLDIDRDKANALGVPFSTINSVLSTALGSSYVNDFPNLGRQQRVIVQA 770 Query: 442 VKRDRTSLAEIGNLTLTTQDGVAVPLSQ-VSKLSSNVEDAVLKRNNRELYIAVQGDVRDG 500 + R ++ NL G VP S V+ N +++ N Y A++ + G Sbjct: 771 DAKRRLQPEDLTNLYARNSSGTMVPFSAFVTAKWINGPVQLIRYNG---YPAMK--IAGG 825 Query: 501 MQPPDVTHAILPKLDAIKAALPAGYHID-TGGSVEESAKADVALAAMFPLMIILMLAVIM 559 P T + ++++ A LP G+ + TG S+EE + A A++ L +I + V+ Sbjct: 826 AAPGRSTGEAMAEMESFVAKLPPGFGFEWTGQSLEEKTSGNQA-PALYALSLIAVFLVLA 884 Query: 560 FQVRSFATMWMVFATAPLGLVGAVPTLLIFHQPFGFNAILGLIGLAGILIRNTLILVDQI 619 S + V PLG++GA+ + + P +G+I + G+ +N +++++ Sbjct: 885 ALYESTSIPLAVMLVVPLGILGALLGVTLRAMPNDVYFKVGMIAVVGLSAKNAILIIEFA 944 Query: 620 RSDLLSGMTPYEAVIESTVRRARPVILTAVAAMLAFIPLTHSSFWGP-----LAYVLIGG 674 + G EA +E+ R RP+I+T++A +L +PL +S G + ++GG Sbjct: 945 KDLQAQGKGLIEATLEAVHLRFRPIIMTSLAFILGVLPLAIASGAGSASQRAIGTGVMGG 1004 Query: 675 VGVGTVLTLLFLPALYAIWFKVKRPAAPGHPAGISHSP 712 + TVL + +P + + K+ + + HSP Sbjct: 1005 MITATVLAVFLVPIFFVVVRKIFKGSERQRKFDAEHSP 1042 >gi|300310690|ref|YP_003774782.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae SmR1] Length = 1049 Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 173/746 (23%), Positives = 314/746 (42%), Gaps = 62/746 (8%) Query: 1 MSLTKVSDQALAIEAAIDEFMIKFVMALAVVIIVSLVTL-GFRVGVVVAAAVPLTLSAVF 59 M + K D + +I+E + + A+ +V +V + L FR ++ AVP+ L F Sbjct: 321 MKVQKPYDTTPFVRISIEEVVRTLIEAVVLVFLVMYLFLQNFRATLIPTIAVPVVLLGTF 380 Query: 60 VIMLATGRDFDRITLGALILSLGLLVDDAIIAIEMMV-VKMEEGMDRISAATYAWGATAA 118 ++ G + +T+ A++L++GLLVDDAI+ +E + V EEG+ A + G + Sbjct: 381 GVLAVFGFTINTLTMFAMVLAIGLLVDDAIVVVENVERVMSEEGLPPKQATRKSMGQISG 440 Query: 119 PMASGTLVTIIGFLPVGFARSTAGEYAGNIFWVVAFSLITSWFVAVLFIPYLGVKML-PN 177 + LV F+P+ F + G + ++ S VA++ P L +L P Sbjct: 441 ALVGVALVLAAVFVPMAFFSGSTGVIYRQFSITIVSAMTLSVLVALVLTPALCATLLKPA 500 Query: 178 IPVHAGGQDAIYATRNYQ------RFRALVRWCVDKKWITAAITIGVFAAAIFGMGFVQK 231 HA + N Q R++ +VR + + W A + A + G + Sbjct: 501 AKGHALATTGFFGWFNRQFDRSNIRYQGIVRHMLGRGWRYMAAYAVLLALVVAGFMKLPV 560 Query: 232 QFFPNSERPELTIEVNLPPGSAFSATDATVKKIEEAL---HKEPEAKI--VSSY----IG 282 F P+ ++ L + LP G+ + TD ++++E+ KE + + VS + G Sbjct: 561 GFLPDEDQGTLFAIMQLPSGATKARTDEVIRQVEQHFLVDQKEAVSGVFAVSGFSFAGSG 620 Query: 283 QGAPRFFLSVNP--ELPNPAFAQLIVLTDNAKDRDALKAKFSKMIADGKFANARVRVSQF 340 Q F+ + P E P + V ++ +ARV F Sbjct: 621 QNMGFAFIKLKPWDERKGPGLSVTDVAAKAGAAFANIR-------------DARV----F 663 Query: 341 VFGPPVPFPVLFRIVGPDLNTVRDIAFKVRDVVQSN--------PDTRDVHL--DWGDRT 390 F PP L G DL + ++Q+ D R V + + + T Sbjct: 664 AFAPPA-VSELGNATGFDLMLKDEANLGHAALMQARNQLLGELMQDKRLVAVRPNGLEDT 722 Query: 391 QTLRLELDQERLRQVGLNPRDAALQLQAILNGASTTQVRDGLRIVDVMVRGVKRDRTSLA 450 RL +D ++ +G+ D + + D R+ VM++G + R + Sbjct: 723 PEFRLSVDTDKAGALGVAMSDINDTIATAWGSSYVNDFIDKGRVKKVMLQGDAQYRMLPS 782 Query: 451 EIGNLTLTTQDGVAVPLSQVSKLSSNVEDAVLKRNNRELYIAVQGDVRDGMQPPDVTHAI 510 ++ + G VP S S S L+R N + + G G AI Sbjct: 783 DVDRWYVRNSAGTMVPFSAFSTASWTSGSPRLERYNGVPSMEILGMALPGAASSGEAMAI 842 Query: 511 LPKLDAIKAALPAGYHID-TGGSVEESAKADVALAAMFPLMIILMLAVIMFQVRSFATMW 569 ++A A +P G + TG S++E A + ++ + I+++ + S+A + Sbjct: 843 ---VEAALAKMPPGIGYEWTGLSLQEKASSG-KTGILYGVSILIVFLALAALYESWAVPF 898 Query: 570 MVFATAPLGLVGAVPTLLIFHQPFGFNAILGLIGLAGILIRNTLILVDQIRSDLLSGMTP 629 V PLG+ GA+ ++ + +GL+ G+ +N +++V+ + G + Sbjct: 899 SVILVVPLGVFGALLGAMLTWKMNDVYFQVGLLTTIGLACKNAILIVEFAKDLYEHGKSL 958 Query: 630 YEAVIESTVRRARPVILTAVAAMLAFIPLTHSSFWG-----PLAYVLIGGVGVGTVLTLL 684 EA +E+ R RP+++T++A +L +P+ S G L +IGG+ GTVL + Sbjct: 959 VEATMEAVRMRLRPILMTSLAFILGVLPMVLGSGAGAGAQHALGTAVIGGMLSGTVLAVF 1018 Query: 685 FLPALYAIWFKV--KRPA-AP-GHPA 706 F+P + I + ++PA AP G PA Sbjct: 1019 FVPLFFVIIMTLFGRKPADAPQGQPA 1044 >gi|300313900|ref|YP_003777992.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae SmR1] Length = 1063 Score = 120 bits (300), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 169/753 (22%), Positives = 318/753 (42%), Gaps = 91/753 (12%) Query: 1 MSLTKVSDQALAIEAAIDEFMIKFVMALAVVIIVSLVTLG-FRVGVVVAAAVPLTLSAVF 59 + +T + DQ++ ++AA+ + + ++A + + L+ LG +R +++ +PL++ A Sbjct: 315 IKITPLFDQSVFVKAAVTGVISEALIAAGLTAAMVLLFLGNWRSTLIIGLTIPLSIMAAI 374 Query: 60 VIMLATGRDFDRITLGALILSLGLLVDDAIIAIEMMVVKMEEGMDRISAATYAWGATAAP 119 +I+ A G + +TLG L LS+G+LVD AI+ IE + + G A G P Sbjct: 375 LILAALGETLNLMTLGGLALSVGILVDQAIVTIENIERHLHLGKPLHDAIIVGAGEIGVP 434 Query: 120 MASGTLVTIIGFLPVGFARSTAGEYAGNIFWVVAFSLITSWFVAVLFIPYLGVKMLPNIP 179 TL I F+P+ F A + V F++ S+ ++ +P L + ++ + Sbjct: 435 AFVATLCICIVFVPMFFLSGVARFLFVPLAEAVVFAMAASYLLSRTLVPTLVMLLMGS-- 492 Query: 180 VHAGGQDAIYATRNYQRFRAL-VRWCVDKKWITAAITIGV-----FAAAIFGMG------ 227 G D+ + + +RA R+ + T ++ + FA A G Sbjct: 493 --HGQVDSAKQSLLQRLYRAFDNRFERVRHGYTLVLSSLLAHRRRFALAFLGFCLLSCLL 550 Query: 228 --FVQKQFFPNSERPELTIEVNLPPGSAFSATDATVKKIEEALHKE-PEAKIVSSYIGQG 284 F+ + FFPN + ++ + + +P G+ T ++E + P +++ + G Sbjct: 551 YPFLGRDFFPNVDGGQIRLHMRMPTGTRIEETARAADEVERVIRTLIPASELETILDNLG 610 Query: 285 APRFFLSVNPELPNPAFAQ------LIVLTDNAKDRDA----LKAKFSKMIADGK--FAN 332 P +N N L+ L + + +A L+A+ + + F Sbjct: 611 VPNS--GINLSYSNAGTIGTLDGEILMALKEGHRPTEALVSMLRAELPRRFPGIEFFFQP 668 Query: 333 ARVRVSQFVFGPPVPFPVLFRIVGPDLNTVRDIAFKVRDVVQSNPDTRDVHLDWGDRTQT 392 A + FG P V F GP++ +A ++ ++ P D H+ + Sbjct: 669 ADIVTQILNFGLPAAIDVQF--TGPNMEANARLAAELTKQIRQIPGAVDAHVHQRLDGPS 726 Query: 393 LRLELDQERLRQVGLNPRDAALQLQAILNGASTTQ------VRDGLRIVDVMVRGVKRDR 446 L L +D+ RL+Q GL+ + L L G+S TQ +G+ + ++ V+ + Sbjct: 727 LDLRMDRTRLQQFGLSASNVGQNLLIALAGSSQTQPAFWLNPNNGV-VYNIAVQSPQYQV 785 Query: 447 TSLAEIGNLTLTTQDGVAVP----LSQVSKLSSNVEDAVLKRNN----RELYIAVQGDVR 498 SL + N+ ++ + L + + + + AV R N ++Y++VQG Sbjct: 786 DSLDALLNIPVSPGANASTTPPQLLGNLVDVHAGRQMAVASRYNIAPAIDVYVSVQGT-- 843 Query: 499 DGMQPPDVTHAILPKLDAIKAALPAGYHIDTGGSVEESAKADVALAAMFPLMIILMLAVI 558 V + ++ IK L G + G VE + L + I+L+ ++ Sbjct: 844 ---DLASVAGKVSALVEQIKPKLARGSQVVIRGQVETMQSSFTGLGVGLAMAIVLVYLLV 900 Query: 559 MFQVRSF---------------ATMWMVFATAPLGLVGAVPTLLIFHQPFGFNAILGLIG 603 + +S+ WM+F T G +VP A+ G I Sbjct: 901 VVNFQSWIDAAIIIAALPAALAGIAWMLFIT---GTTLSVP------------ALTGAIM 945 Query: 604 LAGILIRNTLILVDQIRSDLLSGMTPYEAVIESTVRRARPVILTAVAAMLAFIPLTHSSF 663 G+ N++++V R G TP A +E+ R RPV++TA+A ++ IP+ Sbjct: 946 TMGVATANSILIVAFARQRREEGATPLAAALEAGSTRIRPVLMTALAMIIGMIPMALGLG 1005 Query: 664 WG-----PLAYVLIGGVGVGTVLTLLFLPALYA 691 G PL +IGG+ + TV TL F+P ++A Sbjct: 1006 EGAEQNAPLGRAVIGGLMLATVSTLFFVPVVFA 1038 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.325 0.139 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,906,404 Number of extensions: 72508 Number of successful extensions: 398 Number of sequences better than 1.0e-08: 11 Number of HSP's gapped: 362 Number of HSP's successfully gapped: 19 Length of query: 713 Length of database: 1,619,870 Length adjustment: 92 Effective length of query: 621 Effective length of database: 1,184,250 Effective search space: 735419250 Effective search space used: 735419250 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 134 (56.2 bits)