BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0204.p
         (414 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310514|ref|YP_003774606.1| stearoyl-CoA desaturase oxidore...   716   0.0  

>gi|300310514|ref|YP_003774606.1| stearoyl-CoA desaturase
           oxidoreductase [Herbaspirillum seropedicae SmR1]
          Length = 398

 Score =  716 bits (1847), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/398 (82%), Positives = 366/398 (91%)

Query: 17  MTVDSILDFLSNGLLHATGWQIFFYTLIVTHITIAGVTIYLHRCQAHRALDLHAIPSHFF 76
           MT+D+ILDF++NGLLHA+GWQI  YTL++THITI GVT+YLHRCQAHRAL+LHAIPSHFF
Sbjct: 1   MTLDAILDFVANGLLHASGWQIVIYTLVMTHITIVGVTLYLHRCQAHRALELHAIPSHFF 60

Query: 77  RLWLWMTTGMVTKEWAAIHRKHHAKCETEEDPHSPQVRGIKKVLLEGAELYRTESKNAET 136
           RLWLWMTTGMVTK+WAAIHRKHHAKCETEEDPHSPQ RGIKKV+ EGAELYR ESKN ET
Sbjct: 61  RLWLWMTTGMVTKQWAAIHRKHHAKCETEEDPHSPQTRGIKKVMWEGAELYRAESKNDET 120

Query: 137 MEKYGHGTPDDWVERNVYSRFGWQGVGLMLIINVMLFGVIGLTVWAVQMLWIPITAAGII 196
           MEK+GHGTPDDW+E NVYS++ WQGVGLMLII+V+LFG IGLT+WAVQM WIP  AAG++
Sbjct: 121 MEKFGHGTPDDWLEHNVYSKYSWQGVGLMLIIDVLLFGAIGLTIWAVQMAWIPFWAAGVV 180

Query: 197 NGIGHFWGYRNYDCNDAATNVFPWGIIIGGEELHNNHHTFGTSAKLSSKWYEFDIGWMYI 256
           NG+GHFWGYRNYDC DA+TN+FP GI+IGGEE+HNNHHTFGTSAK S+KWYEFD+GWMYI
Sbjct: 181 NGLGHFWGYRNYDCVDASTNLFPIGILIGGEEMHNNHHTFGTSAKFSAKWYEFDVGWMYI 240

Query: 257 RILEIMGLAKVKKIAPAPKFDRQKLVADFDTLQSVIANRYDVMSKYAKSLKRAWADELEH 316
           RILE  GLAKVKK+ P PKFDRQK V DF+TLQSVIANRYDV +KYA+SLK AW DEL+H
Sbjct: 241 RILETFGLAKVKKVLPVPKFDRQKAVIDFETLQSVIANRYDVTAKYARSLKSAWKDELDH 300

Query: 317 LAEKAKLESRFLKSSKKLLQREPAKLEDGQKQQLSELFTHSKALQTMHEMRVELGAIWGR 376
           L EKAKLESRFLKSSKKLLQREP +LEDGQKQQLSELF HSKALQTMHEMR+EL AIW R
Sbjct: 301 LIEKAKLESRFLKSSKKLLQREPGRLEDGQKQQLSELFAHSKALQTMHEMRIELSAIWER 360

Query: 377 SNSTREQLLQQLQDWCVRAEASGIHALRDFALRLRSYA 414
           S+STREQLLQQLQDWC RAEASG+ ALRDFALRLRSYA
Sbjct: 361 SHSTREQLLQQLQDWCARAEASGVKALRDFALRLRSYA 398


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.324    0.137    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,260,162
Number of extensions: 49963
Number of successful extensions: 197
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 197
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 1,619,870
Length adjustment: 88
Effective length of query: 326
Effective length of database: 1,203,190
Effective search space: 392239940
Effective search space used: 392239940
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 132 (55.5 bits)