BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0047.p
         (196 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313075|ref|YP_003777167.1| gamma-glutamyltranspeptidase [H...   111   4e-26
gi|300310422|ref|YP_003774514.1| gamma-glutamyltranspeptidase [H...    71   6e-14

>gi|300313075|ref|YP_003777167.1| gamma-glutamyltranspeptidase
           [Herbaspirillum seropedicae SmR1]
          Length = 527

 Score =  111 bits (277), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 101/199 (50%), Gaps = 9/199 (4%)

Query: 2   ASAWRSSRPSGGTVYLCTADNEGNMVSFIQSNYMGFGSGLVVPGTGISLHNRGNNFTLDA 61
           A+ W      G T+++  AD +G +VS+IQS +  FGSG+VVP TGI   NRG +FTLD 
Sbjct: 330 AAPWPHPARPGDTIWMGAADAQGRVVSYIQSIFWEFGSGVVVPDTGIVWQNRGASFTLDE 389

Query: 62  AHPNCLAPGKRPYHTIIPGFLTKDGEAVGPFGVMGGFMQPQGHVQMVMNTVDFGLNPQSS 121
              N L PGK P+HT+ P     D      FG MGG  QPQ    +    V FG N Q++
Sbjct: 390 G-VNQLQPGKLPFHTLNPSLAQLDDGRTLAFGTMGGEGQPQTQAAVFTRHVLFGQNLQAA 448

Query: 122 LDAPRW----EW-ESGNKVSIEHTTAEHLFRGLGPAGLGHEVSWSGNQLG-FGRGQIIWR 175
           + APRW     W +    + +E    E   + L  A  GHEV    +     G    +  
Sbjct: 449 VSAPRWLLGRTWGDVSTNLKLEGRIPEATIQALRRA--GHEVQVVDDYADMMGHAGAVCV 506

Query: 176 DANGVLCGGTEPRSDGCVA 194
             +G++ G T+PR+DG  A
Sbjct: 507 HPDGLIEGATDPRADGVCA 525


>gi|300310422|ref|YP_003774514.1| gamma-glutamyltranspeptidase
           [Herbaspirillum seropedicae SmR1]
          Length = 585

 Score = 70.9 bits (172), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 17/190 (8%)

Query: 11  SGGTVYLCTADNEGNMVSFIQSNYMGFGSGLVVPGTGISLHNRGNNFTLDAAHP------ 64
           S  T +   AD +GN+V+   +  + FGSG+V  GTGI+L+N  ++F      P      
Sbjct: 394 SDQTTHYSVADKDGNLVATTYTLNLNFGSGIVATGTGITLNNEMDDFAAKPGVPNAFGLV 453

Query: 65  ----NCLAPGKRPYHTIIPGFLTKDGEAVGPFGVMGGFMQPQGHVQMVMNTVDFGLNPQS 120
               N +AP KRP  ++ P F+ KDG+     G  GG       +Q ++N +D  +N   
Sbjct: 454 GGDANAVAPYKRPLSSMSPTFVLKDGKPFLVTGSPGGSRIITTTLQTILNVIDHDMNVAE 513

Query: 121 SLDAPRWEWE-SGNKVSIEHTTAEHLFRGLGPAGLGHEVSWSGNQLGFGRGQIIWRDANG 179
           +   PR   + + +++ +E   +    + L   G    V     Q   GR Q I   ++G
Sbjct: 514 ATITPRIHHQWAPDQLRVEKGLSADTLKILQDKGQKISV-----QPSMGRTQTIQIRSDG 568

Query: 180 VLCGGTEPRS 189
              G ++PR+
Sbjct: 569 -FDGFSDPRN 577


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.137    0.452 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 794,264
Number of extensions: 37148
Number of successful extensions: 60
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 57
Number of HSP's successfully gapped: 2
Length of query: 196
Length of database: 1,619,870
Length adjustment: 80
Effective length of query: 116
Effective length of database: 1,241,070
Effective search space: 143964120
Effective search space used: 143964120
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 128 (53.9 bits)