BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0026.0098.p
         (299 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310778|ref|YP_003774870.1| aspartyl/asparaginyl beta-hydro...   550   e-158

>gi|300310778|ref|YP_003774870.1| aspartyl/asparaginyl
           beta-hydroxylase transmembrane protein [Herbaspirillum
           seropedicae SmR1]
          Length = 299

 Score =  550 bits (1418), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 254/298 (85%), Positives = 281/298 (94%)

Query: 1   MKWVVVGIYLFSILFIHFRGKVRLPFLRQFFDHSSIMAPINLFMYAFSRVPAVPYPGVSG 60
           MKW +V IYLFSILFIHFRG+VRLPFLRQFFDHSSIM+PINLFMYAFSRVPAVPYP V  
Sbjct: 1   MKWAIVSIYLFSILFIHFRGRVRLPFLRQFFDHSSIMSPINLFMYAFSRVPAVPYPAVKE 60

Query: 61  FQNLHLLDDNWEIIKAEAVNLQNISKIKAAEKNDDAGFNSFFKAGWKRFYLKWYDASHPS 120
           F++L ++D NWE+I+ EAV L+ ++KIKAAEKNDDAGFNSFFKAGWKRFYLKWY+ASHPS
Sbjct: 61  FKDLAIIDQNWEVIRDEAVALREMAKIKAAEKNDDAGFNSFFKAGWKRFYLKWYNASHPS 120

Query: 121 AEQFCPKTVEILRQIPCVKAAMFAELAPGGTLNPHRDPYAGSLRYHLGLVTPNDDRCFIE 180
           AE+FCPKTVEIL+ IPCVKAAMFAELAPGGTLNPHRDP+AGSLRYHLGLVTPNDDRCFIE
Sbjct: 121 AEKFCPKTVEILKGIPCVKAAMFAELAPGGTLNPHRDPFAGSLRYHLGLVTPNDDRCFIE 180

Query: 181 VDGQRYSWRDGKSVVFDETFIHWARNGAETNRIILFCDVERPLRYRWAQTINKWLGKTMM 240
           VDGQRYSWRDG+SVVFDETFIHWA+NGAE+NRIILFCDVERPLRYRWA+ IN +LG+TMM
Sbjct: 181 VDGQRYSWRDGQSVVFDETFIHWAQNGAESNRIILFCDVERPLRYRWAEAINGFLGRTMM 240

Query: 241 TAASSPNETGDQTGRINKLFRFVWLAGQYRRKFKNWNRNAYRATKFGLIIAVALAIIY 298
           TAA+SPNETGDQTGR+NKLFRFVWLAGQYRR+FKNWN+  Y+ TKFGLIIAVAL IIY
Sbjct: 241 TAAASPNETGDQTGRVNKLFRFVWLAGQYRRRFKNWNKTVYKLTKFGLIIAVALLIIY 298


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.326    0.140    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 963,988
Number of extensions: 39486
Number of successful extensions: 95
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 95
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 214
Effective length of database: 1,217,395
Effective search space: 260522530
Effective search space used: 260522530
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 130 (54.7 bits)