BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0026.0025.p
         (214 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311167|ref|YP_003775259.1| peptidase T2, asparaginase 2 pr...   301   3e-83

>gi|300311167|ref|YP_003775259.1| peptidase T2, asparaginase 2
           protein [Herbaspirillum seropedicae SmR1]
          Length = 328

 Score =  301 bits (771), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 147/213 (69%), Positives = 168/213 (78%), Gaps = 2/213 (0%)

Query: 1   MENSAHVLLAGCGADAFARQQGLAIVDPTYFHTDARHQQWLRVRGQSGMMLDHDAAAFTF 60
           ME+S HVLL G  A++FA + G   V+P YFHTDARH+QWLRVRGQS  MLDHDA++F F
Sbjct: 114 MEHSEHVLLVGPAAESFAARHGAVTVEPGYFHTDARHEQWLRVRGQSRAMLDHDASSFAF 173

Query: 61  KESAHGTAPVDPIDPDNKFGTVGAVALDMHGNVAAATSTGGITNKQAGRVGDTPLIGAGC 120
            E A   AP +PIDPD+KFGTVGAVALD  GN+AAATSTGGITNKQ GRVGD+P+IGAGC
Sbjct: 174 AEKA--AAPTEPIDPDHKFGTVGAVALDQFGNLAAATSTGGITNKQPGRVGDSPIIGAGC 231

Query: 121 YAANATAAISATGTGEVFIRTVAAYDVAARMAYAGATLQEAMEQVVMQVLPAYEGRGGLI 180
           YA NAT A+SATGTGE F+RT A YD+AARMAYAG +L+ A   VV + LP   GRGG+I
Sbjct: 232 YANNATVAVSATGTGEAFMRTAACYDIAARMAYAGQSLEAASHAVVFETLPKVGGRGGVI 291

Query: 181 AVDAQGNLELSFNTEGMYRGYARGGDTPVTAIY 213
           A+D QGNL L FNTEGMYR Y RG   PVTAIY
Sbjct: 292 AIDGQGNLALPFNTEGMYRAYGRGELAPVTAIY 324


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.132    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 635,040
Number of extensions: 24352
Number of successful extensions: 81
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 78
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 1,619,870
Length adjustment: 81
Effective length of query: 133
Effective length of database: 1,236,335
Effective search space: 164432555
Effective search space used: 164432555
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 128 (53.9 bits)