BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0026.0015.p
         (348 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313731|ref|YP_003777823.1| sugar phosphate dehydrogenase o...   437   e-124

>gi|300313731|ref|YP_003777823.1| sugar phosphate dehydrogenase
           oxidoreductase [Herbaspirillum seropedicae SmR1]
          Length = 708

 Score =  437 bits (1124), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 203/243 (83%), Positives = 222/243 (91%)

Query: 19  QTSKPRIASAWDDAHAATLDEAQLLLYRSNLLGADKAITNFGGGNTSAKIVMQDPLSGEQ 78
           +  + RIASAWD+A+AATLDE QLLLYRSNLLGADK ITNFGGGNTSAKI M DPL+G+ 
Sbjct: 13  KAGQSRIASAWDEAYAATLDEPQLLLYRSNLLGADKEITNFGGGNTSAKIAMPDPLTGQT 72

Query: 79  VEVLWVKGSGGDLGSIKLDGFSTLYMDKLEALRARYRGLEHEDEMVGYLPHCTFNLNPRA 138
           VEVLWVKGSGGDLGSIKLDGF+TLYMDKLEALR+RYRGLEHEDEMVGYLPHCT+NLN RA
Sbjct: 73  VEVLWVKGSGGDLGSIKLDGFATLYMDKLEALRSRYRGLEHEDEMVGYLPHCTYNLNARA 132

Query: 139 ASIDTPLHAYIPRRHVDHMHPDAVIAIAACKNSKSLTAGVFNGELGWLPWQRPGYDLGLK 198
           ASIDTPLHAYIPRRHVDHMHPDAVIAIAACKNS+ LTA +F GELGWLPWQRPGYDLGLK
Sbjct: 133 ASIDTPLHAYIPRRHVDHMHPDAVIAIAACKNSRDLTARIFEGELGWLPWQRPGYDLGLK 192

Query: 199 LEKMSREQPALKGIVLEGHGLFTWGDTAKSCYETTLDIIRRADDWLAANSKTAAFGGKRH 258
           LE++ R QP LKGIVLEGHGLFTWGD+A+ CYE TL++IRRAD WLAANS+T AFGG R+
Sbjct: 193 LEQLVRAQPHLKGIVLEGHGLFTWGDSARECYENTLNVIRRADAWLAANSRTPAFGGARY 252

Query: 259 AAL 261
            AL
Sbjct: 253 QAL 255


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.135    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,133,896
Number of extensions: 47548
Number of successful extensions: 127
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 127
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 1,619,870
Length adjustment: 86
Effective length of query: 262
Effective length of database: 1,212,660
Effective search space: 317716920
Effective search space used: 317716920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 131 (55.1 bits)